RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ANKRD18BA2A2Z9 1011 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 SSFA2P28290 1259 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 RBM5P52756 815 aaKnown RBP eCLIP16.03■□□□□ 0.16
C9orf47-203ENST00000375851 CCAR1Q8IX12 1150 aaKnown RBP16.03■□□□□ 0.16
C9orf47-203ENST00000375851 RHPN1Q8TCX5 695 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 TEX13AQ9BXU3 409 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-203ENST00000375851 MAGEC2Q9UBF1 373 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-203ENST00000375851 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.16
C9orf47-203ENST00000375851 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
C9orf47-203ENST00000375851 PPP1R1BQ9UD71 204 aaPredicted RBP16.02■□□□□ 0.16
C9orf47-203ENST00000375851 TNNQ9UQP3 1299 aa16.02■□□□□ 0.16
C9orf47-203ENST00000375851 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.16
C9orf47-203ENST00000375851 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
C9orf47-203ENST00000375851 ANKRD44Q8N8A2 993 aa16.02■□□□□ 0.16
C9orf47-203ENST00000375851 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
C9orf47-203ENST00000375851 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
C9orf47-203ENST00000375851 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.15
C9orf47-203ENST00000375851 WASF1Q92558 559 aa16.02■□□□□ 0.15
C9orf47-203ENST00000375851 JARID2Q92833 1246 aaPredicted RBP16.02■□□□□ 0.15
C9orf47-203ENST00000375851 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.15
C9orf47-203ENST00000375851 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.15
C9orf47-203ENST00000375851 A0A1W2PP64 1363 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 VAMP4O75379 141 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 ZSCAN29Q8IWY8 852 aaPredicted RBP16.01■□□□□ 0.15
C9orf47-203ENST00000375851 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
C9orf47-203ENST00000375851 NPATQ14207 1427 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 HMGB1P09429 215 aaKnown RBP16.01■□□□□ 0.15
C9orf47-203ENST00000375851 RLBP1P12271 317 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 TNPO1Q92973 898 aaKnown RBP16.01■□□□□ 0.15
C9orf47-203ENST00000375851 SMARCE1Q969G3 411 aa16.01■□□□□ 0.15
C9orf47-203ENST00000375851 SF3B2Q13435 895 aaKnown RBP16.01■□□□□ 0.15
C9orf47-203ENST00000375851 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 EIF2AK4Q9P2K8 1649 aaKnown RBP16■□□□□ 0.15
C9orf47-203ENST00000375851 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
C9orf47-203ENST00000375851 SLC39A6Q13433 755 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 MAP3K11Q16584 847 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 NGLY1Q96IV0 654 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 DACH1Q9UI36 760 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 ABCC2Q92887 1545 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 GOLIM4O00461 696 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 SCAND2PQ9GZW5 306 aaPredicted RBP16■□□□□ 0.15
C9orf47-203ENST00000375851 SNRKQ9NRH2 765 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 SDSP20132 328 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 FLT4P35916 1363 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 SLC5A1P13866 664 aa16■□□□□ 0.15
C9orf47-203ENST00000375851 HMGN5P82970 282 aaKnown RBP16■□□□□ 0.15
C9orf47-203ENST00000375851 CT47A1Q5JQC4 288 aaPredicted RBP16■□□□□ 0.15
C9orf47-203ENST00000375851 ZNF213O14771 459 aa15.99■□□□□ 0.15
C9orf47-203ENST00000375851 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
C9orf47-203ENST00000375851 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
C9orf47-203ENST00000375851 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
C9orf47-203ENST00000375851 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
C9orf47-203ENST00000375851 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
C9orf47-203ENST00000375851 STIM1Q13586 685 aa15.99■□□□□ 0.15
C9orf47-203ENST00000375851 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 PDE1AP54750 535 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 LRRC59Q96AG4 307 aaKnown RBP15.98■□□□□ 0.15
C9orf47-203ENST00000375851 ESPNB1AK53 854 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 CAMK4Q16566 473 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 ZNF771Q7L3S4 317 aaPredicted RBP15.98■□□□□ 0.15
C9orf47-203ENST00000375851 FILIP1Q7Z7B0 1213 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 EYA1Q99502 592 aa15.98■□□□□ 0.15
C9orf47-203ENST00000375851 CCP110O43303 1012 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 ZMYM3Q14202 1370 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 ZHX3Q9H4I2 956 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 UHRF1BP1Q6BDS2 1440 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 YTHDC2Q9H6S0 1430 aaKnown RBP15.97■□□□□ 0.15
C9orf47-203ENST00000375851 GUCY1B3Q02153 619 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 TEX35Q5T0J7 233 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
C9orf47-203ENST00000375851 MSH6P52701 1360 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 CCDC196A0A1B0GTZ2 297 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 KCNA6P17658 529 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 PPFIBP1Q86W92 1011 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
C9orf47-203ENST00000375851 USP5P45974 858 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 COL17A1Q9UMD9 1497 aaPredicted RBP15.96■□□□□ 0.15
C9orf47-203ENST00000375851 KIF21AQ7Z4S6 1674 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 ALDH1L1O75891 902 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 DHX8Q14562 1220 aaKnown RBP15.96■□□□□ 0.15
C9orf47-203ENST00000375851 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 ADGRL2O95490 1459 aa15.96■□□□□ 0.15
C9orf47-203ENST00000375851 GRM8O00222 908 aa15.96■□□□□ 0.14
C9orf47-203ENST00000375851 CAGE1Q8TC20 777 aa15.96■□□□□ 0.14
C9orf47-203ENST00000375851 MKNK2Q9HBH9 465 aa15.96■□□□□ 0.14
C9orf47-203ENST00000375851 ZNHIT6Q9NWK9 470 aaKnown RBP15.96■□□□□ 0.14
C9orf47-203ENST00000375851 MAP3K19Q56UN5 1328 aa15.95■□□□□ 0.14
C9orf47-203ENST00000375851 ABCC1P33527 1531 aa15.95■□□□□ 0.14
C9orf47-203ENST00000375851 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
C9orf47-203ENST00000375851 CCT2P78371 535 aaKnown RBP15.95■□□□□ 0.14
C9orf47-203ENST00000375851 DZIP1Q86YF9 867 aaKnown RBP15.95■□□□□ 0.14
C9orf47-203ENST00000375851 PRM3Q9NNZ6 103 aa15.95■□□□□ 0.14
C9orf47-203ENST00000375851 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
C9orf47-203ENST00000375851 ZNF287Q9HBT7 754 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms