RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 EDC4Q6P2E9 1401 aaKnown RBP21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 NUCB1Q02818 461 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 KSR2Q6VAB6 950 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 GOLIM4O00461 696 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 LMBR1LQ6UX01 489 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 ANKRD1Q15327 319 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 CWC22Q9HCG8 908 aaKnown RBP21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 BTG4Q9NY30 223 aa21.36■■□□□ 1.01
PTPDC1-202ENST00000375360 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 ZFYVE16Q7Z3T8 1539 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 ANKRD18BA2A2Z9 1011 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 DDB1Q16531 1140 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 GRM8O00222 908 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 XBP1P17861 261 aa21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 RBM5P52756 815 aaKnown RBP eCLIP21.35■■□□□ 1.01
PTPDC1-202ENST00000375360 CCDC83Q8IWF9 413 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 PIBF1Q8WXW3 757 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 CTNNA3Q9UI47 895 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 SLC3A2P08195 630 aaKnown RBP21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 ZBTB40Q9NUA8 1239 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 MAP3K5Q99683 1374 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 SDSP20132 328 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 MINDY4BA8MYZ0 360 aa21.34■■□□□ 1.01
PTPDC1-202ENST00000375360 RNMTO43148 476 aaKnown RBP21.33■■□□□ 1.01
PTPDC1-202ENST00000375360 MCM4P33991 863 aa21.33■■□□□ 1
PTPDC1-202ENST00000375360 STK38Q15208 465 aa21.33■■□□□ 1
PTPDC1-202ENST00000375360 WDR33Q9C0J8 1336 aaKnown RBP21.32■■□□□ 1
PTPDC1-202ENST00000375360 TTC22Q5TAA0 569 aa21.32■■□□□ 1
PTPDC1-202ENST00000375360 ANKIB1Q9P2G1 1089 aa21.32■■□□□ 1
PTPDC1-202ENST00000375360 PLA2R1Q13018 1463 aa21.32■■□□□ 1
PTPDC1-202ENST00000375360 DDX46Q7L014 1031 aaKnown RBP21.32■■□□□ 1
PTPDC1-202ENST00000375360 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
PTPDC1-202ENST00000375360 MBD3O95983 291 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 NASPP49321 788 aaPredicted RBP21.31■■□□□ 1
PTPDC1-202ENST00000375360 BRMS1Q9HCU9 246 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 ATP6V1AP38606 617 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 PDE1AP54750 535 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 CCDC69A6NI79 296 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 PPFIA3O75145 1194 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 KRT32Q14532 448 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 MAGI2Q86UL8 1455 aa21.31■■□□□ 1
PTPDC1-202ENST00000375360 ATP8B2P98198 1209 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 IMMTQ16891 758 aaKnown RBP21.3■■□□□ 1
PTPDC1-202ENST00000375360 CCDC82Q8N4S0 544 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 LINS1Q8NG48 757 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 TCEAL9Q9UHQ7 104 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 PDE4CQ08493 712 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 MPNDQ8N594 471 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 DCAF5Q96JK2 942 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 UBAC1Q9BSL1 405 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 CAVIN4Q5BKX8 364 aa21.3■■□□□ 1
PTPDC1-202ENST00000375360 KINO60870 393 aaKnown RBP21.3■■□□□ 1
PTPDC1-202ENST00000375360 ZSCAN29Q8IWY8 852 aaPredicted RBP21.3■■□□□ 1
PTPDC1-202ENST00000375360 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
PTPDC1-202ENST00000375360 SBNO1A3KN83 1393 aa21.29■■□□□ 1
PTPDC1-202ENST00000375360 ME1P48163 572 aa21.29■■□□□ 1
PTPDC1-202ENST00000375360 CHL1O00533 1208 aa21.29■■□□□ 1
PTPDC1-202ENST00000375360 CEP85Q6P2H3 762 aa21.29■■□□□ 1
PTPDC1-202ENST00000375360 TRIM22Q8IYM9 498 aa21.29■■□□□ 1
PTPDC1-202ENST00000375360 IQSEC3Q9UPP2 1182 aaPredicted RBP21.29■■□□□ 1
PTPDC1-202ENST00000375360 U3KPZ7 1027 aaPredicted RBP21.29■■□□□ 1
PTPDC1-202ENST00000375360 ADGBQ8N7X0 1667 aa21.29■■□□□ 1
PTPDC1-202ENST00000375360 MLH3Q9UHC1 1453 aa21.28■■□□□ 1
PTPDC1-202ENST00000375360 SLAIN2Q9P270 581 aa21.28■■□□□ 1
PTPDC1-202ENST00000375360 HOOK1Q9UJC3 728 aaKnown RBP21.28■■□□□ 1
PTPDC1-202ENST00000375360 TSPOAP1O95153 1857 aa21.28■■□□□ 1
PTPDC1-202ENST00000375360 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
PTPDC1-202ENST00000375360 MRE11P49959 708 aa21.27■■□□□ 1
PTPDC1-202ENST00000375360 HAND2P61296 217 aa21.27■■□□□ 1
PTPDC1-202ENST00000375360 KRT85P78386 507 aa21.27■■□□□ 1
PTPDC1-202ENST00000375360 ZNF592Q92610 1267 aa21.27■■□□□ 1
PTPDC1-202ENST00000375360 EVI5LQ96CN4 794 aa21.27■■□□□ 1
PTPDC1-202ENST00000375360 PCMTD1Q96MG8 357 aaPredicted RBP21.27■■□□□ 1
PTPDC1-202ENST00000375360 ZBTB7BO15156 539 aaPredicted RBP21.27■■□□□ 1
PTPDC1-202ENST00000375360 NAPBQ9H115 298 aa21.27■■□□□ 1
PTPDC1-202ENST00000375360 SIRT1Q96EB6 747 aa21.27■□□□□ 0.99
PTPDC1-202ENST00000375360 ALDH1L1O75891 902 aa21.26■□□□□ 0.99
PTPDC1-202ENST00000375360 ZNF790Q6PG37 636 aa21.26■□□□□ 0.99
PTPDC1-202ENST00000375360 ZSCAN31Q96LW9 406 aaPredicted RBP21.26■□□□□ 0.99
PTPDC1-202ENST00000375360 TSR1Q2NL82 804 aaKnown RBP21.26■□□□□ 0.99
PTPDC1-202ENST00000375360 TCEANC2Q96MN5 208 aa21.26■□□□□ 0.99
PTPDC1-202ENST00000375360 TBC1D32Q96NH3 1257 aa21.26■□□□□ 0.99
PTPDC1-202ENST00000375360 MAP3K12Q12852 859 aa21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 DCTPP1Q9H773 170 aa21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 AK7Q96M32 723 aa21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 LMTK3Q96Q04 1460 aa21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 TPM3P06753 285 aa21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 SLC5A1P13866 664 aa21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 CCDC47Q96A33 483 aaKnown RBP21.25■□□□□ 0.99
PTPDC1-202ENST00000375360 GUCY1B3Q02153 619 aa21.24■□□□□ 0.99
PTPDC1-202ENST00000375360 CIZ1Q9ULV3 898 aaPredicted RBP21.24■□□□□ 0.99
PTPDC1-202ENST00000375360 RFC4P35249 363 aa21.23■□□□□ 0.99
PTPDC1-202ENST00000375360 ZNF396Q96N95 335 aaPredicted RBP21.23■□□□□ 0.99
PTPDC1-202ENST00000375360 DDX21Q9NR30 783 aaKnown RBP eCLIP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms