RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PLEKHO1Q53GL0 409 aaPredicted RBP20.81■□□□□ 0.92
RXRB-201ENST00000374680 CWC27Q6UX04 472 aaKnown RBP20.81■□□□□ 0.92
RXRB-201ENST00000374680 FAM43AQ8N2R8 423 aa20.81■□□□□ 0.92
RXRB-201ENST00000374680 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
RXRB-201ENST00000374680 SLIT1O75093 1534 aa20.8■□□□□ 0.92
RXRB-201ENST00000374680 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
RXRB-201ENST00000374680 MYL6BP14649 208 aa20.8■□□□□ 0.92
RXRB-201ENST00000374680 ZDHHC9Q9Y397 364 aa20.8■□□□□ 0.92
RXRB-201ENST00000374680 CPA1P15085 419 aa20.79■□□□□ 0.92
RXRB-201ENST00000374680 BEND3Q5T5X7 828 aa20.79■□□□□ 0.92
RXRB-201ENST00000374680 NALCNQ8IZF0 1738 aa20.79■□□□□ 0.92
RXRB-201ENST00000374680 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
RXRB-201ENST00000374680 NUCB2P80303 420 aa20.78■□□□□ 0.92
RXRB-201ENST00000374680 PROSER2Q86WR7 435 aaPredicted RBP20.78■□□□□ 0.92
RXRB-201ENST00000374680 SSH3Q8TE77 659 aa20.78■□□□□ 0.92
RXRB-201ENST00000374680 SIL1Q9H173 461 aa20.78■□□□□ 0.92
RXRB-201ENST00000374680 NLRP2Q9NX02 1062 aa20.78■□□□□ 0.92
RXRB-201ENST00000374680 GDPD2Q9HCC8 539 aa20.77■□□□□ 0.92
RXRB-201ENST00000374680 RNMTO43148 476 aaKnown RBP20.77■□□□□ 0.92
RXRB-201ENST00000374680 MCCP23508 829 aa20.77■□□□□ 0.91
RXRB-201ENST00000374680 SKOR2Q2VWA4 1001 aaPredicted RBP20.77■□□□□ 0.91
RXRB-201ENST00000374680 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
RXRB-201ENST00000374680 KRT28Q7Z3Y7 464 aa20.76■□□□□ 0.91
RXRB-201ENST00000374680 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
RXRB-201ENST00000374680 KLHDC4Q8TBB5 520 aa20.76■□□□□ 0.91
RXRB-201ENST00000374680 NSFL1CQ9UNZ2 370 aaKnown RBP20.76■□□□□ 0.91
RXRB-201ENST00000374680 FMN2Q9NZ56 1722 aa20.75■□□□□ 0.91
RXRB-201ENST00000374680 NWD1Q149M9 1564 aa20.75■□□□□ 0.91
RXRB-201ENST00000374680 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
RXRB-201ENST00000374680 CHRNA2Q15822 529 aa20.74■□□□□ 0.91
RXRB-201ENST00000374680 LMBRD1Q9NUN5 540 aa20.74■□□□□ 0.91
RXRB-201ENST00000374680 ARHGEF25Q86VW2 580 aa20.74■□□□□ 0.91
RXRB-201ENST00000374680 ANKARQ7Z5J8 1434 aa20.74■□□□□ 0.91
RXRB-201ENST00000374680 CSB-PGBD3P0DP91 1061 aa20.73■□□□□ 0.91
RXRB-201ENST00000374680 KIF1BPQ96EK5 621 aa20.73■□□□□ 0.91
RXRB-201ENST00000374680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
RXRB-201ENST00000374680 CCDC8Q9H0W5 538 aaPredicted RBP20.73■□□□□ 0.91
RXRB-201ENST00000374680 DBF4Q9UBU7 674 aaPredicted RBP20.73■□□□□ 0.91
RXRB-201ENST00000374680 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
RXRB-201ENST00000374680 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
RXRB-201ENST00000374680 TRIM44Q96DX7 344 aaPredicted RBP20.72■□□□□ 0.91
RXRB-201ENST00000374680 PI4K2BQ8TCG2 481 aa20.72■□□□□ 0.91
RXRB-201ENST00000374680 STAP2Q9UGK3 403 aa20.72■□□□□ 0.91
RXRB-201ENST00000374680 KLHL40Q2TBA0 621 aa20.71■□□□□ 0.91
RXRB-201ENST00000374680 RASEFQ8IZ41 740 aa20.71■□□□□ 0.91
RXRB-201ENST00000374680 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
RXRB-201ENST00000374680 ADCY9O60503 1353 aa20.71■□□□□ 0.91
RXRB-201ENST00000374680 CEMIPQ8WUJ3 1361 aa20.71■□□□□ 0.91
RXRB-201ENST00000374680 GPT2Q8TD30 523 aa20.71■□□□□ 0.91
RXRB-201ENST00000374680 CWC22Q9HCG8 908 aaKnown RBP20.71■□□□□ 0.91
RXRB-201ENST00000374680 CYP2E1P05181 493 aaPredicted RBP20.7■□□□□ 0.9
RXRB-201ENST00000374680 POLA2Q14181 598 aa20.7■□□□□ 0.9
RXRB-201ENST00000374680 NASPP49321 788 aaPredicted RBP20.69■□□□□ 0.9
RXRB-201ENST00000374680 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
RXRB-201ENST00000374680 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
RXRB-201ENST00000374680 AACSQ86V21 672 aa20.69■□□□□ 0.9
RXRB-201ENST00000374680 ZSCAN23Q3MJ62 389 aa20.69■□□□□ 0.9
RXRB-201ENST00000374680 CLASRPQ8N2M8 674 aaKnown RBP20.69■□□□□ 0.9
RXRB-201ENST00000374680 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
RXRB-201ENST00000374680 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
RXRB-201ENST00000374680 PXDNQ92626 1479 aa20.68■□□□□ 0.9
RXRB-201ENST00000374680 RAB11FIP3O75154 756 aa20.68■□□□□ 0.9
RXRB-201ENST00000374680 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 CNTROBQ8N137 903 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 SUCLG2Q96I99 432 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 DIAPH3Q9NSV4 1193 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 BABAM1Q9NWV8 329 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 PRIM1P49642 420 aaKnown RBP20.67■□□□□ 0.9
RXRB-201ENST00000374680 AMOTQ4VCS5 1084 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 RAPGEF4Q8WZA2 1011 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 SYCE3A1L190 88 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
RXRB-201ENST00000374680 NDUFB9Q9Y6M9 179 aa20.67■□□□□ 0.9
RXRB-201ENST00000374680 NAP1L5Q96NT1 182 aaPredicted RBP20.66■□□□□ 0.9
RXRB-201ENST00000374680 PTH1RQ03431 593 aa20.66■□□□□ 0.9
RXRB-201ENST00000374680 BOLA2Q9H3K6 86 aa20.66■□□□□ 0.9
RXRB-201ENST00000374680 TLR7Q9NYK1 1049 aaKnown RBP20.65■□□□□ 0.9
RXRB-201ENST00000374680 SGSM2O43147 1006 aa20.65■□□□□ 0.9
RXRB-201ENST00000374680 KCNJ4P48050 445 aa20.65■□□□□ 0.9
RXRB-201ENST00000374680 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
RXRB-201ENST00000374680 TCEANC2Q96MN5 208 aa20.65■□□□□ 0.9
RXRB-201ENST00000374680 TMEM63CQ9P1W3 806 aa20.65■□□□□ 0.9
RXRB-201ENST00000374680 SNX14Q9Y5W7 946 aa20.65■□□□□ 0.9
RXRB-201ENST00000374680 EDC3Q96F86 508 aaKnown RBP20.64■□□□□ 0.9
RXRB-201ENST00000374680 ATP5J2-PTCD1G3V325 749 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 PTCD1O75127 700 aaKnown RBP20.64■□□□□ 0.89
RXRB-201ENST00000374680 COPS6Q7L5N1 327 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 RBSNQ9H1K0 784 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 RGPD2P0DJD1 1756 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 XRN1Q8IZH2 1706 aaKnown RBP20.64■□□□□ 0.89
RXRB-201ENST00000374680 CASTP20810 708 aaKnown RBP20.64■□□□□ 0.89
RXRB-201ENST00000374680 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 MYD88Q99836 296 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
RXRB-201ENST00000374680 HSPA4P34932 840 aa20.63■□□□□ 0.89
RXRB-201ENST00000374680 MPNDQ8N594 471 aa20.63■□□□□ 0.89
RXRB-201ENST00000374680 PTMSP20962 102 aa20.63■□□□□ 0.89
RXRB-201ENST00000374680 G3BP1Q13283 466 aaKnown RBP eCLIP20.63■□□□□ 0.898e-8■■■■■ 29.2
RXRB-201ENST00000374680 COL9A3Q14050 684 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms