RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 NFATC2IPQ8NCF5 419 aa21.71■■□□□ 1.07
TRAPPC3-203ENST00000373163 FOXN1O15353 648 aa21.7■■□□□ 1.06
TRAPPC3-203ENST00000373163 TNNT2P45379 298 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC3-203ENST00000373163 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
TRAPPC3-203ENST00000373163 C2CD5Q86YS7 1000 aa21.69■■□□□ 1.06
TRAPPC3-203ENST00000373163 PRDM10Q9NQV6 1147 aa21.69■■□□□ 1.06
TRAPPC3-203ENST00000373163 SOS1Q07889 1333 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC3-203ENST00000373163 TIAM2Q8IVF5 1701 aa21.69■■□□□ 1.06
TRAPPC3-203ENST00000373163 CHADLQ6NUI6 762 aa21.68■■□□□ 1.06
TRAPPC3-203ENST00000373163 ADAMTS7Q9UKP4 1686 aa21.68■■□□□ 1.06
TRAPPC3-203ENST00000373163 TJP1Q07157 1748 aa21.68■■□□□ 1.06
TRAPPC3-203ENST00000373163 SERPINB2P05120 415 aa21.67■■□□□ 1.06
TRAPPC3-203ENST00000373163 CNTNAP1P78357 1384 aa21.66■■□□□ 1.06
TRAPPC3-203ENST00000373163 H0YIN7 160 aa21.66■■□□□ 1.06
TRAPPC3-203ENST00000373163 DNAJC10Q8IXB1 793 aa21.66■■□□□ 1.06
TRAPPC3-203ENST00000373163 NARFQ9UHQ1 456 aa21.66■■□□□ 1.06
TRAPPC3-203ENST00000373163 ERFEQ4G0M1 354 aa21.65■■□□□ 1.06
TRAPPC3-203ENST00000373163 CTCFP49711 727 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC3-203ENST00000373163 AIDAQ96BJ3 306 aa21.64■■□□□ 1.05
TRAPPC3-203ENST00000373163 COL15A1P39059 1388 aa21.63■■□□□ 1.05
TRAPPC3-203ENST00000373163 POTEIP0CG38 1075 aa21.63■■□□□ 1.05
TRAPPC3-203ENST00000373163 POTEJP0CG39 1038 aa21.63■■□□□ 1.05
TRAPPC3-203ENST00000373163 CARMIL3Q8ND23 1372 aa21.62■■□□□ 1.05
TRAPPC3-203ENST00000373163 DLEC1Q9Y238 1755 aa21.62■■□□□ 1.05
TRAPPC3-203ENST00000373163 CYP19A1P11511 503 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC3-203ENST00000373163 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
TRAPPC3-203ENST00000373163 BCL2L12Q9HB09 334 aa21.62■■□□□ 1.05
TRAPPC3-203ENST00000373163 NRXN2Q9P2S2 1712 aa21.62■■□□□ 1.05
TRAPPC3-203ENST00000373163 C21orf2O43822 256 aa21.6■■□□□ 1.05
TRAPPC3-203ENST00000373163 ZNF622Q969S3 477 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRAPPC3-203ENST00000373163 ZNF219Q9P2Y4 722 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC3-203ENST00000373163 ZBTB1Q9Y2K1 713 aa21.6■■□□□ 1.05
TRAPPC3-203ENST00000373163 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
TRAPPC3-203ENST00000373163 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
TRAPPC3-203ENST00000373163 PASKQ96RG2 1323 aa21.58■■□□□ 1.05
TRAPPC3-203ENST00000373163 VEGFBP49765 207 aa21.58■■□□□ 1.05
TRAPPC3-203ENST00000373163 BICDL1Q6ZP65 573 aa21.58■■□□□ 1.05
TRAPPC3-203ENST00000373163 LBX1P52954 281 aa21.57■■□□□ 1.04
TRAPPC3-203ENST00000373163 FAM161AQ3B820 660 aa21.57■■□□□ 1.04
TRAPPC3-203ENST00000373163 TAOK3Q9H2K8 898 aa21.57■■□□□ 1.04
TRAPPC3-203ENST00000373163 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
TRAPPC3-203ENST00000373163 LTBP3Q9NS15 1303 aa21.56■■□□□ 1.04
TRAPPC3-203ENST00000373163 SULT6B1Q6IMI4 303 aa21.56■■□□□ 1.04
TRAPPC3-203ENST00000373163 LDHDQ86WU2 507 aa21.56■■□□□ 1.04
TRAPPC3-203ENST00000373163 PDZRN3Q9UPQ7 1066 aa21.56■■□□□ 1.04
TRAPPC3-203ENST00000373163 IQCA1LA6NCM1 817 aa21.55■■□□□ 1.04
TRAPPC3-203ENST00000373163 TMEM88BA6NKF7 163 aa21.55■■□□□ 1.04
TRAPPC3-203ENST00000373163 PDE6BP35913 854 aa21.55■■□□□ 1.04
TRAPPC3-203ENST00000373163 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
TRAPPC3-203ENST00000373163 WBP1LQ9NX94 342 aa21.55■■□□□ 1.04
TRAPPC3-203ENST00000373163 AKAP4Q5JQC9 854 aa21.54■■□□□ 1.04
TRAPPC3-203ENST00000373163 ABHD8Q96I13 439 aa21.54■■□□□ 1.04
TRAPPC3-203ENST00000373163 BRIP1Q9BX63 1249 aa21.54■■□□□ 1.04
TRAPPC3-203ENST00000373163 CANXP27824 592 aaKnown RBP21.53■■□□□ 1.04
TRAPPC3-203ENST00000373163 CCDC88AQ3V6T2 1871 aa21.52■■□□□ 1.04
TRAPPC3-203ENST00000373163 TAF1DQ9H5J8 278 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC3-203ENST00000373163 LGR6Q9HBX8 967 aa21.52■■□□□ 1.04
TRAPPC3-203ENST00000373163 TBC1D9BQ66K14 1250 aa21.51■■□□□ 1.03
TRAPPC3-203ENST00000373163 L3MBTL3Q96JM7 780 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC3-203ENST00000373163 ITGBL1O95965 494 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC3-203ENST00000373163 HSPA8P11142 646 aaKnown RBP21.5■■□□□ 1.03
TRAPPC3-203ENST00000373163 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
TRAPPC3-203ENST00000373163 CCDC24Q8N4L8 307 aa21.5■■□□□ 1.03
TRAPPC3-203ENST00000373163 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
TRAPPC3-203ENST00000373163 MRC1P22897 1456 aa21.5■■□□□ 1.03
TRAPPC3-203ENST00000373163 A0A087WZG4 1122 aa21.49■■□□□ 1.03
TRAPPC3-203ENST00000373163 SOGA3Q5TF21 947 aa21.49■■□□□ 1.03
TRAPPC3-203ENST00000373163 PRR5LQ6MZQ0 368 aa21.49■■□□□ 1.03
TRAPPC3-203ENST00000373163 CNKSR1Q969H4 720 aa21.49■■□□□ 1.03
TRAPPC3-203ENST00000373163 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
TRAPPC3-203ENST00000373163 RNMTO43148 476 aaKnown RBP21.48■■□□□ 1.03
TRAPPC3-203ENST00000373163 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
TRAPPC3-203ENST00000373163 EAPPQ56P03 285 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC3-203ENST00000373163 FER1L6Q2WGJ9 1857 aa21.47■■□□□ 1.03
TRAPPC3-203ENST00000373163 PRPF40BQ6NWY9 871 aaKnown RBP21.47■■□□□ 1.03
TRAPPC3-203ENST00000373163 RASSF10A6NK89 507 aa21.46■■□□□ 1.03
TRAPPC3-203ENST00000373163 STARD3NLO95772 234 aa21.46■■□□□ 1.03
TRAPPC3-203ENST00000373163 STYK1Q6J9G0 422 aa21.46■■□□□ 1.03
TRAPPC3-203ENST00000373163 PCDH10Q9P2E7 1040 aa21.46■■□□□ 1.03
TRAPPC3-203ENST00000373163 DICER1Q9UPY3 1922 aaKnown RBP21.46■■□□□ 1.03
TRAPPC3-203ENST00000373163 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC3-203ENST00000373163 NPHP1O15259 732 aa21.45■■□□□ 1.02
TRAPPC3-203ENST00000373163 IL13P35225 146 aa21.45■■□□□ 1.02
TRAPPC3-203ENST00000373163 MAP2K1Q02750 393 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC3-203ENST00000373163 DEFB115Q30KQ5 88 aa21.45■■□□□ 1.02
TRAPPC3-203ENST00000373163 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.02
TRAPPC3-203ENST00000373163 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.02
TRAPPC3-203ENST00000373163 MLLT1Q03111 559 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC3-203ENST00000373163 CNBD1Q8NA66 436 aa21.44■■□□□ 1.02
TRAPPC3-203ENST00000373163 HACL1Q9UJ83 578 aa21.44■■□□□ 1.02
TRAPPC3-203ENST00000373163 SRGNP10124 158 aa21.43■■□□□ 1.02
TRAPPC3-203ENST00000373163 MORC1Q86VD1 984 aa21.43■■□□□ 1.02
TRAPPC3-203ENST00000373163 MASTLQ96GX5 879 aa21.43■■□□□ 1.02
TRAPPC3-203ENST00000373163 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
TRAPPC3-203ENST00000373163 ZNF330Q9Y3S2 320 aaPredicted RBP21.43■■□□□ 1.02
TRAPPC3-203ENST00000373163 WDR33Q9C0J8 1336 aaKnown RBP21.43■■□□□ 1.02
TRAPPC3-203ENST00000373163 CCDC85CA6NKD9 419 aa21.42■■□□□ 1.02
TRAPPC3-203ENST00000373163 EPHX2P34913 555 aa21.42■■□□□ 1.02
TRAPPC3-203ENST00000373163 ST5P78524 1137 aa21.42■■□□□ 1.02
TRAPPC3-203ENST00000373163 ZNF541Q9H0D2 1346 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms