RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ZBTB1Q9Y2K1 713 aa17.73■□□□□ 0.43
TRAPPC3-201ENST00000373159 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
TRAPPC3-201ENST00000373159 TJP1Q07157 1748 aa17.72■□□□□ 0.43
TRAPPC3-201ENST00000373159 BRCA1P38398 1863 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-201ENST00000373159 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
TRAPPC3-201ENST00000373159 C16orf71Q8IYS4 520 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC3-201ENST00000373159 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
TRAPPC3-201ENST00000373159 MRC1P22897 1456 aa17.71■□□□□ 0.43
TRAPPC3-201ENST00000373159 FSTL1Q12841 308 aa17.71■□□□□ 0.43
TRAPPC3-201ENST00000373159 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
TRAPPC3-201ENST00000373159 COL15A1P39059 1388 aa17.7■□□□□ 0.42
TRAPPC3-201ENST00000373159 SERPINB2P05120 415 aa17.7■□□□□ 0.42
TRAPPC3-201ENST00000373159 RRAGCQ9HB90 399 aa17.7■□□□□ 0.42
TRAPPC3-201ENST00000373159 ADAMTS7Q9UKP4 1686 aa17.7■□□□□ 0.42
TRAPPC3-201ENST00000373159 STARD3NLO95772 234 aa17.69■□□□□ 0.42
TRAPPC3-201ENST00000373159 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
TRAPPC3-201ENST00000373159 CC2D1BQ5T0F9 858 aaKnown RBP17.69■□□□□ 0.42
TRAPPC3-201ENST00000373159 ZC3H4Q9UPT8 1303 aaKnown RBP17.69■□□□□ 0.42
TRAPPC3-201ENST00000373159 KCPQ6ZWJ8 1503 aa17.68■□□□□ 0.42
TRAPPC3-201ENST00000373159 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-201ENST00000373159 A0A087WZG4 1122 aa17.67■□□□□ 0.42
TRAPPC3-201ENST00000373159 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
TRAPPC3-201ENST00000373159 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
TRAPPC3-201ENST00000373159 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
TRAPPC3-201ENST00000373159 H0YIN7 160 aa17.66■□□□□ 0.42
TRAPPC3-201ENST00000373159 LMNB1P20700 586 aa17.66■□□□□ 0.42
TRAPPC3-201ENST00000373159 C2CD5Q86YS7 1000 aa17.66■□□□□ 0.42
TRAPPC3-201ENST00000373159 TEX13AQ9BXU3 409 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-201ENST00000373159 RASSF7Q02833 373 aa17.65■□□□□ 0.42
TRAPPC3-201ENST00000373159 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
TRAPPC3-201ENST00000373159 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
TRAPPC3-201ENST00000373159 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-201ENST00000373159 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
TRAPPC3-201ENST00000373159 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
TRAPPC3-201ENST00000373159 PRELPP51888 382 aa17.64■□□□□ 0.41
TRAPPC3-201ENST00000373159 TEFQ10587 303 aa17.64■□□□□ 0.41
TRAPPC3-201ENST00000373159 KLRG1Q96E93 195 aa17.64■□□□□ 0.41
TRAPPC3-201ENST00000373159 GLTPD2A6NH11 291 aa17.63■□□□□ 0.41
TRAPPC3-201ENST00000373159 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-201ENST00000373159 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
TRAPPC3-201ENST00000373159 JMYQ8N9B5 988 aa17.63■□□□□ 0.41
TRAPPC3-201ENST00000373159 SMC1BQ8NDV3 1235 aa17.63■□□□□ 0.41
TRAPPC3-201ENST00000373159 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
TRAPPC3-201ENST00000373159 VEGFAP15692 232 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-201ENST00000373159 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-201ENST00000373159 HTRA3P83110 453 aa17.62■□□□□ 0.41
TRAPPC3-201ENST00000373159 TBC1D9BQ66K14 1250 aa17.62■□□□□ 0.41
TRAPPC3-201ENST00000373159 BRIP1Q9BX63 1249 aa17.62■□□□□ 0.41
TRAPPC3-201ENST00000373159 HEG1Q9ULI3 1381 aa17.62■□□□□ 0.41
TRAPPC3-201ENST00000373159 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
TRAPPC3-201ENST00000373159 SBF1O95248 1867 aa17.61■□□□□ 0.41
TRAPPC3-201ENST00000373159 NFKBIEO00221 500 aa17.61■□□□□ 0.41
TRAPPC3-201ENST00000373159 PDE6BP35913 854 aa17.61■□□□□ 0.41
TRAPPC3-201ENST00000373159 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
TRAPPC3-201ENST00000373159 TBC1D2BQ9UPU7 963 aa17.6■□□□□ 0.41
TRAPPC3-201ENST00000373159 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
TRAPPC3-201ENST00000373159 AFDNP55196 1824 aaKnown RBP17.59■□□□□ 0.41
TRAPPC3-201ENST00000373159 COL3A1P02461 1466 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC3-201ENST00000373159 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
TRAPPC3-201ENST00000373159 CEMIPQ8WUJ3 1361 aa17.58■□□□□ 0.4
TRAPPC3-201ENST00000373159 A1BGP04217 495 aa17.58■□□□□ 0.4
TRAPPC3-201ENST00000373159 ZNF622Q969S3 477 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAPPC3-201ENST00000373159 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
TRAPPC3-201ENST00000373159 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
TRAPPC3-201ENST00000373159 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
TRAPPC3-201ENST00000373159 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
TRAPPC3-201ENST00000373159 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC3-201ENST00000373159 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
TRAPPC3-201ENST00000373159 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
TRAPPC3-201ENST00000373159 POTECB2RU33 542 aa17.56■□□□□ 0.4
TRAPPC3-201ENST00000373159 C21orf2O43822 256 aa17.56■□□□□ 0.4
TRAPPC3-201ENST00000373159 CAMTA2O94983 1202 aa17.56■□□□□ 0.4
TRAPPC3-201ENST00000373159 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC3-201ENST00000373159 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
TRAPPC3-201ENST00000373159 KCNQ3O43525 872 aa17.55■□□□□ 0.4
TRAPPC3-201ENST00000373159 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
TRAPPC3-201ENST00000373159 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-201ENST00000373159 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
TRAPPC3-201ENST00000373159 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
TRAPPC3-201ENST00000373159 CNKSR1Q969H4 720 aa17.54■□□□□ 0.4
TRAPPC3-201ENST00000373159 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
TRAPPC3-201ENST00000373159 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
TRAPPC3-201ENST00000373159 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
TRAPPC3-201ENST00000373159 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 ERFEQ4G0M1 354 aa17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
TRAPPC3-201ENST00000373159 PCNTO95613 3336 aa17.52■□□□□ 0.4
TRAPPC3-201ENST00000373159 SRGNP10124 158 aa17.52■□□□□ 0.4
TRAPPC3-201ENST00000373159 ST5P78524 1137 aa17.52■□□□□ 0.4
TRAPPC3-201ENST00000373159 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
TRAPPC3-201ENST00000373159 NPHP1O15259 732 aa17.51■□□□□ 0.39
TRAPPC3-201ENST00000373159 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
TRAPPC3-201ENST00000373159 COL13A1Q5TAT6 717 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC3-201ENST00000373159 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
TRAPPC3-201ENST00000373159 MASTLQ96GX5 879 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms