RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 CCDC97Q96F63 343 aaPredicted RBP11.51□□□□□ -0.57
TRERF1-204ENST00000372922 MX1P20591 662 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
TRERF1-204ENST00000372922 ALDH1L2Q3SY69 923 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 FAM177A1Q8N128 213 aaPredicted RBP11.51□□□□□ -0.57
TRERF1-204ENST00000372922 EXOC6BQ9Y2D4 811 aa11.51□□□□□ -0.57
TRERF1-204ENST00000372922 USP8P40818 1118 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 FKBP15Q5T1M5 1219 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 ABCC11Q96J66 1382 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
TRERF1-204ENST00000372922 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 TMEM87AQ8NBN3 555 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 LRRFIP2Q9Y608 721 aaKnown RBP11.5□□□□□ -0.57
TRERF1-204ENST00000372922 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC148Q8NFR7 591 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
TRERF1-204ENST00000372922 ZNF213O14771 459 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 BOLA2Q9H3K6 86 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
TRERF1-204ENST00000372922 KIF20AO95235 890 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 TIAM1Q13009 1591 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 VPS36Q86VN1 386 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 BAG4O95429 457 aaKnown RBP11.49□□□□□ -0.57
TRERF1-204ENST00000372922 SPA17Q15506 151 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 MAP3K11Q16584 847 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
TRERF1-204ENST00000372922 ANAPC15P60006 121 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 CDC5LQ99459 802 aaKnown RBP11.49□□□□□ -0.57
TRERF1-204ENST00000372922 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
TRERF1-204ENST00000372922 AMOTL2Q9Y2J4 779 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 DNMBPQ6XZF7 1577 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 KIF14Q15058 1648 aa11.49□□□□□ -0.57
TRERF1-204ENST00000372922 A0A087WZG4 1122 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 LDHCP07864 332 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 CATIPQ7Z7H3 387 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 TTF1Q15361 905 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-204ENST00000372922 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 SLFN5Q08AF3 891 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-204ENST00000372922 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 AKNAQ7Z591 1439 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 CFAP100Q494V2 611 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 ARHGAP29Q52LW3 1261 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC12Q8WUD4 166 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-204ENST00000372922 DNAAF4Q8WXU2 420 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 C8orf76Q96K31 380 aa11.48□□□□□ -0.57
TRERF1-204ENST00000372922 SH2B1Q9NRF2 756 aaPredicted RBP11.48□□□□□ -0.57
TRERF1-204ENST00000372922 SPTY2D1Q68D10 685 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-204ENST00000372922 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
TRERF1-204ENST00000372922 MPHOSPH6Q99547 160 aaKnown RBP11.47□□□□□ -0.57
TRERF1-204ENST00000372922 NF2P35240 595 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 PPP1R42Q7Z4L9 355 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 UBA5Q9GZZ9 404 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 BAG3O95817 575 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 CACNA2D4Q7Z3S7 1137 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC91Q7Z6B0 441 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 KIAA0586Q9BVV6 1533 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC194A0A1B0GVG4 234 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 FOXO3O43524 673 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 NLRP5P59047 1200 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 CCDC83Q8IWF9 413 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 FEZ1Q99689 392 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
TRERF1-204ENST00000372922 MAGI1Q96QZ7 1491 aaPredicted RBP11.47□□□□□ -0.57
TRERF1-204ENST00000372922 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-204ENST00000372922 ST5P78524 1137 aa11.46□□□□□ -0.57
TRERF1-204ENST00000372922 TTC21BQ7Z4L5 1316 aa11.46□□□□□ -0.57
TRERF1-204ENST00000372922 ADGRL1O94910 1474 aa11.46□□□□□ -0.57
TRERF1-204ENST00000372922 IFIT3O14879 490 aaKnown RBP11.46□□□□□ -0.57
TRERF1-204ENST00000372922 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
TRERF1-204ENST00000372922 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
TRERF1-204ENST00000372922 ARHGEF11O15085 1522 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 MYO1BO43795 1136 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 KIF5BP33176 963 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 BACH2Q9BYV9 841 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 IQGAP2Q13576 1575 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 PTPRCP08575 1304 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 PLEKHH1Q9ULM0 1364 aa11.46□□□□□ -0.58
TRERF1-204ENST00000372922 RFC4P35249 363 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 FAM193AP78312 1265 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 NME9Q86XW9 330 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 ANO10Q9NW15 660 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-204ENST00000372922 CWC25Q9NXE8 425 aaPredicted RBP11.45□□□□□ -0.58
TRERF1-204ENST00000372922 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 GOLGA8BA8MQT2 603 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 PDE4BQ07343 736 aa11.45□□□□□ -0.58
TRERF1-204ENST00000372922 CETN1Q12798 172 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms