RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 HYPKQ9NX55 129 aa29.45■■■□□ 2.3
LHX3-201ENST00000371746 ABCA3Q99758 1704 aa29.45■■■□□ 2.3
LHX3-201ENST00000371746 HSP90AB1P08238 724 aaKnown RBP29.44■■■□□ 2.3
LHX3-201ENST00000371746 CABP4P57796 275 aa29.44■■■□□ 2.3
LHX3-201ENST00000371746 AIMP1Q12904 312 aaKnown RBP29.44■■■□□ 2.3
LHX3-201ENST00000371746 DDX21Q9NR30 783 aaKnown RBP eCLIP29.44■■■□□ 2.3
LHX3-201ENST00000371746 ZCRB1Q8TBF4 217 aaKnown RBP29.44■■■□□ 2.3
LHX3-201ENST00000371746 NHSL1Q5SYE7 1610 aa29.43■■■□□ 2.3
LHX3-201ENST00000371746 KSR2Q6VAB6 950 aa29.43■■■□□ 2.3
LHX3-201ENST00000371746 TTC5Q8N0Z6 440 aa29.43■■■□□ 2.3
LHX3-201ENST00000371746 MRC1P22897 1456 aa29.43■■■□□ 2.3
LHX3-201ENST00000371746 EVA1CP58658 441 aa29.42■■■□□ 2.3
LHX3-201ENST00000371746 MYL6BP14649 208 aa29.41■■■□□ 2.3
LHX3-201ENST00000371746 CARD10Q9BWT7 1032 aa29.41■■■□□ 2.3
LHX3-201ENST00000371746 PCDH11XQ9BZA7 1347 aa29.41■■■□□ 2.3
LHX3-201ENST00000371746 PCDH11YQ9BZA8 1340 aa29.41■■■□□ 2.3
LHX3-201ENST00000371746 PPP1R42Q7Z4L9 355 aa29.41■■■□□ 2.3
LHX3-201ENST00000371746 USP35Q9P2H5 1018 aa29.4■■■□□ 2.3
LHX3-201ENST00000371746 IL2RBP14784 551 aa29.4■■■□□ 2.3
LHX3-201ENST00000371746 CWF19L2Q2TBE0 894 aaKnown RBP29.4■■■□□ 2.3
LHX3-201ENST00000371746 LRRCC1Q9C099 1032 aa29.4■■■□□ 2.3
LHX3-201ENST00000371746 USP16Q9Y5T5 823 aa29.4■■■□□ 2.3
LHX3-201ENST00000371746 IBTKQ9P2D0 1353 aaPredicted RBP29.39■■■□□ 2.3
LHX3-201ENST00000371746 C5P01031 1676 aa29.39■■■□□ 2.3
LHX3-201ENST00000371746 CDC45O75419 566 aa29.39■■■□□ 2.3
LHX3-201ENST00000371746 PIP4K2AP48426 406 aaPredicted RBP29.39■■■□□ 2.29
LHX3-201ENST00000371746 BECN1Q14457 450 aa29.39■■■□□ 2.29
LHX3-201ENST00000371746 SSH3Q8TE77 659 aa29.39■■■□□ 2.29
LHX3-201ENST00000371746 SNRPA1P09661 255 aaKnown RBP29.37■■■□□ 2.29
LHX3-201ENST00000371746 DDX54Q8TDD1 881 aaKnown RBP29.37■■■□□ 2.29
LHX3-201ENST00000371746 FMNL2Q96PY5 1086 aa29.37■■■□□ 2.29
LHX3-201ENST00000371746 SRGAP3O43295 1099 aa29.36■■■□□ 2.29
LHX3-201ENST00000371746 TSHZ3Q63HK5 1081 aa29.36■■■□□ 2.29
LHX3-201ENST00000371746 SDSP20132 328 aa29.36■■■□□ 2.29
LHX3-201ENST00000371746 PARP4Q9UKK3 1724 aaKnown RBP29.36■■■□□ 2.29
LHX3-201ENST00000371746 DDX58O95786 925 aaKnown RBP29.35■■■□□ 2.29
LHX3-201ENST00000371746 TBC1D2Q9BYX2 928 aa29.35■■■□□ 2.29
LHX3-201ENST00000371746 C9orf78Q9NZ63 289 aaPredicted RBP29.35■■■□□ 2.29
LHX3-201ENST00000371746 PDE1AP54750 535 aa29.35■■■□□ 2.29
LHX3-201ENST00000371746 POLA2Q14181 598 aa29.34■■■□□ 2.29
LHX3-201ENST00000371746 ALDH1L1O75891 902 aa29.34■■■□□ 2.29
LHX3-201ENST00000371746 XAGE3Q8WTP9 111 aa29.34■■■□□ 2.29
LHX3-201ENST00000371746 RBM25P49756 843 aaKnown RBP29.33■■■□□ 2.29
LHX3-201ENST00000371746 BTG4Q9NY30 223 aa29.33■■■□□ 2.29
LHX3-201ENST00000371746 SURF6O75683 361 aaKnown RBP29.33■■■□□ 2.29
LHX3-201ENST00000371746 COPS6Q7L5N1 327 aa29.33■■■□□ 2.29
LHX3-201ENST00000371746 RIC3Q7Z5B4 369 aa29.32■■■□□ 2.28
LHX3-201ENST00000371746 LINS1Q8NG48 757 aa29.32■■■□□ 2.28
LHX3-201ENST00000371746 IL1RAPL2Q9NP60 686 aa29.31■■■□□ 2.28
LHX3-201ENST00000371746 SALL3Q9BXA9 1300 aa29.31■■■□□ 2.28
LHX3-201ENST00000371746 OSBPL3Q9H4L5 887 aa29.31■■■□□ 2.28
LHX3-201ENST00000371746 LRP10Q7Z4F1 713 aa29.3■■■□□ 2.28
LHX3-201ENST00000371746 IGKV5-2P06315 115 aa29.29■■■□□ 2.28
LHX3-201ENST00000371746 MX1P20591 662 aa29.29■■■□□ 2.28
LHX3-201ENST00000371746 ERVV-2B6SEH9 535 aa29.28■■■□□ 2.28
LHX3-201ENST00000371746 NKX1-1Q15270 411 aaPredicted RBP29.28■■■□□ 2.28
LHX3-201ENST00000371746 GRM8O00222 908 aa29.28■■■□□ 2.28
LHX3-201ENST00000371746 ROBO1Q9Y6N7 1651 aa29.27■■■□□ 2.28
LHX3-201ENST00000371746 SLKQ9H2G2 1235 aaPredicted RBP29.26■■■□□ 2.27
LHX3-201ENST00000371746 GLI3P10071 1580 aa29.25■■■□□ 2.27
LHX3-201ENST00000371746 PTCD1O75127 700 aaKnown RBP29.24■■■□□ 2.27
LHX3-201ENST00000371746 ANKRD13DQ6ZTN6 518 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 RHPN1Q8TCX5 695 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 RAB11FIP3O75154 756 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 MTX1Q13505 466 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 SUCLG2Q96I99 432 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 KIF2CQ99661 725 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 MYD88Q99836 296 aa29.24■■■□□ 2.27
LHX3-201ENST00000371746 NEXNQ0ZGT2 675 aa29.23■■■□□ 2.27
LHX3-201ENST00000371746 NUTM1Q86Y26 1132 aa29.23■■■□□ 2.27
LHX3-201ENST00000371746 KAZALD1Q96I82 304 aa29.23■■■□□ 2.27
LHX3-201ENST00000371746 NEURL1BA8MQ27 555 aa29.22■■■□□ 2.27
LHX3-201ENST00000371746 METTL22Q9BUU2 404 aaPredicted RBP29.22■■■□□ 2.27
LHX3-201ENST00000371746 SHANK3Q9BYB0 1731 aa29.22■■■□□ 2.27
LHX3-201ENST00000371746 RTL5Q5HYW3 569 aaPredicted RBP29.22■■■□□ 2.27
LHX3-201ENST00000371746 UTYO14607 1347 aa29.21■■■□□ 2.27
LHX3-201ENST00000371746 SPRYD3Q8NCJ5 442 aa29.21■■■□□ 2.27
LHX3-201ENST00000371746 BICC1Q9H694 974 aaKnown RBP29.21■■■□□ 2.27
LHX3-201ENST00000371746 CASC1Q6TDU7 716 aa29.2■■■□□ 2.27
LHX3-201ENST00000371746 KIF1BPQ96EK5 621 aa29.2■■■□□ 2.27
LHX3-201ENST00000371746 STAP2Q9UGK3 403 aa29.2■■■□□ 2.27
LHX3-201ENST00000371746 NBPF26B4DH59 902 aa29.2■■■□□ 2.26
LHX3-201ENST00000371746 NBPF14Q5TI25 921 aa29.2■■■□□ 2.26
LHX3-201ENST00000371746 NBPF10Q6P3W6 841 aaKnown RBP29.2■■■□□ 2.26
LHX3-201ENST00000371746 NBPF15Q8N660 670 aa29.2■■■□□ 2.26
LHX3-201ENST00000371746 PA2G4Q9UQ80 394 aaKnown RBP29.2■■■□□ 2.26
LHX3-201ENST00000371746 GCKRQ14397 625 aa29.19■■■□□ 2.26
LHX3-201ENST00000371746 OS9Q13438 667 aaPredicted RBP29.19■■■□□ 2.26
LHX3-201ENST00000371746 HDAC5Q9UQL6 1122 aa29.18■■■□□ 2.26
LHX3-201ENST00000371746 KCPQ6ZWJ8 1503 aa29.17■■■□□ 2.26
LHX3-201ENST00000371746 AHDC1Q5TGY3 1603 aaPredicted RBP29.17■■■□□ 2.26
LHX3-201ENST00000371746 NFKBIBQ15653 356 aa29.16■■■□□ 2.26
LHX3-201ENST00000371746 JARID2Q92833 1246 aaPredicted RBP29.16■■■□□ 2.26
LHX3-201ENST00000371746 LTBP4Q8N2S1 1624 aa29.16■■■□□ 2.26
LHX3-201ENST00000371746 TRIM6-TRIM34B2RNG4 842 aa29.16■■■□□ 2.26
LHX3-201ENST00000371746 A1BGP04217 495 aa29.16■■■□□ 2.26
LHX3-201ENST00000371746 RBM42Q9BTD8 480 aaKnown RBP29.16■■■□□ 2.26
LHX3-201ENST00000371746 HSP90AB4PQ58FF6 505 aa29.15■■■□□ 2.26
LHX3-201ENST00000371746 UNC5CLQ8IV45 518 aa29.15■■■□□ 2.26
LHX3-201ENST00000371746 HSCBQ8IWL3 235 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms