RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 TJP1Q07157 1748 aa19.14■□□□□ 0.66
EDF1-202ENST00000371648 ZPR1O75312 459 aa19.14■□□□□ 0.65
EDF1-202ENST00000371648 ARHGAP27Q6ZUM4 889 aa19.14■□□□□ 0.65
EDF1-202ENST00000371648 TEFQ10587 303 aa19.13■□□□□ 0.65
EDF1-202ENST00000371648 USPL1Q5W0Q7 1092 aa19.13■□□□□ 0.65
EDF1-202ENST00000371648 SOS1Q07889 1333 aaPredicted RBP19.13■□□□□ 0.65
EDF1-202ENST00000371648 MAPK8IP3Q9UPT6 1336 aa19.13■□□□□ 0.65
EDF1-202ENST00000371648 N4BP2Q86UW6 1770 aaPredicted RBP19.13■□□□□ 0.65
EDF1-202ENST00000371648 VIRMAQ69YN4 1812 aaKnown RBP19.13■□□□□ 0.65
EDF1-202ENST00000371648 KIF13BQ9NQT8 1826 aa19.12■□□□□ 0.65
EDF1-202ENST00000371648 MRC1P22897 1456 aa19.12■□□□□ 0.65
EDF1-202ENST00000371648 KCNA3P22001 575 aa19.12■□□□□ 0.65
EDF1-202ENST00000371648 IL17REQ8NFR9 667 aa19.12■□□□□ 0.65
EDF1-202ENST00000371648 TM4SF1P30408 202 aa19.11■□□□□ 0.65
EDF1-202ENST00000371648 ZBTB1Q9Y2K1 713 aa19.11■□□□□ 0.65
EDF1-202ENST00000371648 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
EDF1-202ENST00000371648 POLRMTO00411 1230 aaKnown RBP19.1■□□□□ 0.65
EDF1-202ENST00000371648 TTC5Q8N0Z6 440 aa19.1■□□□□ 0.65
EDF1-202ENST00000371648 VSIG10Q8N0Z9 540 aa19.1■□□□□ 0.65
EDF1-202ENST00000371648 PIM2Q9P1W9 311 aa19.1■□□□□ 0.65
EDF1-202ENST00000371648 KCPQ6ZWJ8 1503 aa19.1■□□□□ 0.65
EDF1-202ENST00000371648 CANXP27824 592 aaKnown RBP19.09■□□□□ 0.65
EDF1-202ENST00000371648 CHRNA5P30532 468 aa19.09■□□□□ 0.65
EDF1-202ENST00000371648 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
EDF1-202ENST00000371648 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
EDF1-202ENST00000371648 MCM10Q7L590 875 aa19.08■□□□□ 0.64
EDF1-202ENST00000371648 COL15A1P39059 1388 aa19.07■□□□□ 0.64
EDF1-202ENST00000371648 HTATSF1O43719 755 aaKnown RBP19.07■□□□□ 0.64
EDF1-202ENST00000371648 NFIXQ14938 502 aa19.07■□□□□ 0.64
EDF1-202ENST00000371648 DALRD3Q5D0E6 543 aaKnown RBP19.07■□□□□ 0.64
EDF1-202ENST00000371648 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
EDF1-202ENST00000371648 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
EDF1-202ENST00000371648 STARD3NLO95772 234 aa19.06■□□□□ 0.64
EDF1-202ENST00000371648 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
EDF1-202ENST00000371648 NFE2L2Q16236 605 aa19.06■□□□□ 0.64
EDF1-202ENST00000371648 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
EDF1-202ENST00000371648 ZNF496Q96IT1 587 aaPredicted RBP19.06■□□□□ 0.64
EDF1-202ENST00000371648 BTBD11A6QL63 1104 aa19.05■□□□□ 0.64
EDF1-202ENST00000371648 KIF3CO14782 793 aa19.05■□□□□ 0.64
EDF1-202ENST00000371648 ZNF790Q6PG37 636 aa19.05■□□□□ 0.64
EDF1-202ENST00000371648 BCL2L12Q9HB09 334 aa19.05■□□□□ 0.64
EDF1-202ENST00000371648 C9orf131Q5VYM1 1079 aa19.04■□□□□ 0.64
EDF1-202ENST00000371648 SERPINB2P05120 415 aa19.03■□□□□ 0.64
EDF1-202ENST00000371648 EIF5P55010 431 aaKnown RBP19.03■□□□□ 0.64
EDF1-202ENST00000371648 RIPK4P57078 832 aa19.03■□□□□ 0.64
EDF1-202ENST00000371648 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
EDF1-202ENST00000371648 BICDL1Q6ZP65 573 aa19.03■□□□□ 0.64
EDF1-202ENST00000371648 RUNDC1Q96C34 613 aa19.03■□□□□ 0.64
EDF1-202ENST00000371648 HEG1Q9ULI3 1381 aa19.03■□□□□ 0.64
EDF1-202ENST00000371648 CEP350Q5VT06 3117 aa19.02■□□□□ 0.64
EDF1-202ENST00000371648 TEX13AQ9BXU3 409 aaPredicted RBP19.02■□□□□ 0.64
EDF1-202ENST00000371648 ZNF330Q9Y3S2 320 aaPredicted RBP19.02■□□□□ 0.64
EDF1-202ENST00000371648 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.63
EDF1-202ENST00000371648 A0A087WZG4 1122 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 KCNQ3O43525 872 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 HSPA6P17066 643 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 CCDC184Q52MB2 194 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
EDF1-202ENST00000371648 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
EDF1-202ENST00000371648 TAF7Q15545 349 aaPredicted RBP19■□□□□ 0.63
EDF1-202ENST00000371648 TBC1D2BQ9UPU7 963 aa19■□□□□ 0.63
EDF1-202ENST00000371648 RRP7AQ9Y3A4 280 aaKnown RBP19■□□□□ 0.63
EDF1-202ENST00000371648 BRCA1P38398 1863 aaKnown RBP19■□□□□ 0.63
EDF1-202ENST00000371648 UBR2Q8IWV8 1755 aa18.99■□□□□ 0.63
EDF1-202ENST00000371648 A1BGP04217 495 aa18.99■□□□□ 0.63
EDF1-202ENST00000371648 NMRK2Q9NPI5 230 aa18.99■□□□□ 0.63
EDF1-202ENST00000371648 LMOD3Q0VAK6 560 aa18.98■□□□□ 0.63
EDF1-202ENST00000371648 TBC1D9BQ66K14 1250 aa18.98■□□□□ 0.63
EDF1-202ENST00000371648 C2CD5Q86YS7 1000 aa18.98■□□□□ 0.63
EDF1-202ENST00000371648 THUMPD2Q9BTF0 503 aaKnown RBP18.98■□□□□ 0.63
EDF1-202ENST00000371648 MIS18AQ9NYP9 233 aa18.98■□□□□ 0.63
EDF1-202ENST00000371648 RNF181Q9P0P0 153 aa18.98■□□□□ 0.63
EDF1-202ENST00000371648 IL6STP40189 918 aaPredicted RBP18.97■□□□□ 0.63
EDF1-202ENST00000371648 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
EDF1-202ENST00000371648 PNISRQ8TF01 805 aaKnown RBP18.96■□□□□ 0.63
EDF1-202ENST00000371648 SIPA1L3O60292 1781 aaPredicted RBP18.96■□□□□ 0.63
EDF1-202ENST00000371648 ARFGEF1Q9Y6D6 1849 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 CARMIL3Q8ND23 1372 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 H0YIN7 160 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 TOMM70O94826 608 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 CCDC24Q8N4L8 307 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 TTLL6Q8N841 843 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 USP16Q9Y5T5 823 aa18.95■□□□□ 0.62
EDF1-202ENST00000371648 AFDNP55196 1824 aaKnown RBP18.95■□□□□ 0.62
EDF1-202ENST00000371648 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
EDF1-202ENST00000371648 RASSF7Q02833 373 aa18.94■□□□□ 0.62
EDF1-202ENST00000371648 PRAMEF22A3QJZ6 481 aa18.93■□□□□ 0.62
EDF1-202ENST00000371648 APAF1O14727 1248 aa18.93■□□□□ 0.62
EDF1-202ENST00000371648 NRXN2Q9P2S2 1712 aa18.92■□□□□ 0.62
EDF1-202ENST00000371648 CAMTA2O94983 1202 aa18.92■□□□□ 0.62
EDF1-202ENST00000371648 LAS1LQ9Y4W2 734 aaKnown RBP18.92■□□□□ 0.62
EDF1-202ENST00000371648 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
EDF1-202ENST00000371648 SNRPA1P09661 255 aaKnown RBP18.91■□□□□ 0.62
EDF1-202ENST00000371648 PRR5LQ6MZQ0 368 aa18.91■□□□□ 0.62
EDF1-202ENST00000371648 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
EDF1-202ENST00000371648 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
EDF1-202ENST00000371648 ZNF622Q969S3 477 aaKnown RBP eCLIP18.91■□□□□ 0.624e-13■□□□□ 8.2
EDF1-202ENST00000371648 SETDB2Q96T68 719 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms