RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 LDHCP07864 332 aa17.35■□□□□ 0.37
NDC1-201ENST00000371429 RANBP6O60518 1105 aaKnown RBP17.35■□□□□ 0.37
NDC1-201ENST00000371429 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
NDC1-201ENST00000371429 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
NDC1-201ENST00000371429 STIM1Q13586 685 aa17.35■□□□□ 0.37
NDC1-201ENST00000371429 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
NDC1-201ENST00000371429 IL16Q14005 1332 aa17.35■□□□□ 0.37
NDC1-201ENST00000371429 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
NDC1-201ENST00000371429 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
NDC1-201ENST00000371429 SEC63Q9UGP8 760 aaKnown RBP17.35■□□□□ 0.37
NDC1-201ENST00000371429 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
NDC1-201ENST00000371429 TRAK2O60296 914 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 SMC2O95347 1197 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 C20orf194Q5TEA3 1177 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 DDX11Q96FC9 970 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 COPS6Q7L5N1 327 aa17.34■□□□□ 0.37
NDC1-201ENST00000371429 GPS2Q13227 327 aa17.33■□□□□ 0.37
NDC1-201ENST00000371429 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.37
NDC1-201ENST00000371429 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.37
NDC1-201ENST00000371429 SNRKQ9NRH2 765 aa17.33■□□□□ 0.37
NDC1-201ENST00000371429 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.37
NDC1-201ENST00000371429 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 SYCP1Q15431 976 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 POLKQ9UBT6 870 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 FLT4P35916 1363 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 NUP160Q12769 1436 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 ZNF213O14771 459 aa17.33■□□□□ 0.36
NDC1-201ENST00000371429 RNF41Q9H4P4 317 aaPredicted RBP17.33■□□□□ 0.36
NDC1-201ENST00000371429 UPF3BQ9BZI7 483 aaKnown RBP17.32■□□□□ 0.36
NDC1-201ENST00000371429 CFAP45Q9UL16 551 aa17.32■□□□□ 0.36
NDC1-201ENST00000371429 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
NDC1-201ENST00000371429 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
NDC1-201ENST00000371429 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
NDC1-201ENST00000371429 CCDC96Q2M329 555 aa17.32■□□□□ 0.36
NDC1-201ENST00000371429 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
NDC1-201ENST00000371429 GOLIM4O00461 696 aa17.31■□□□□ 0.36
NDC1-201ENST00000371429 BAG3O95817 575 aa17.31■□□□□ 0.36
NDC1-201ENST00000371429 NASPP49321 788 aaPredicted RBP17.31■□□□□ 0.36
NDC1-201ENST00000371429 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
NDC1-201ENST00000371429 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
NDC1-201ENST00000371429 PDCL3Q9H2J4 239 aa17.31■□□□□ 0.36
NDC1-201ENST00000371429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.31■□□□□ 0.364e-6■■■■■ 55.2
NDC1-201ENST00000371429 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 PRAG1Q86YV5 1406 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
NDC1-201ENST00000371429 ANKRD18AQ8IVF6 992 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 SMARCE1Q969G3 411 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 TNMDQ9H2S6 317 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 NIP7Q9Y221 180 aaKnown RBP eCLIP17.3■□□□□ 0.36
NDC1-201ENST00000371429 DACH1Q9UI36 760 aa17.3■□□□□ 0.36
NDC1-201ENST00000371429 NPATQ14207 1427 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 PDIA4P13667 645 aaKnown RBP17.29■□□□□ 0.36
NDC1-201ENST00000371429 CCDC173Q0VFZ6 552 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 TSPY26PQ9H489 355 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 BTG4Q9NY30 223 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 PAF1Q8N7H5 531 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 EVI5LQ96CN4 794 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 TTLL5Q6EMB2 1281 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
NDC1-201ENST00000371429 HMGB1P09429 215 aaKnown RBP17.28■□□□□ 0.36
NDC1-201ENST00000371429 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
NDC1-201ENST00000371429 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 MNS1Q8NEH6 495 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 FEZ1Q99689 392 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 TNIP1Q15025 636 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 TANGO6Q9C0B7 1094 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 ATP10AO60312 1499 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 WDR62O43379 1518 aa17.28■□□□□ 0.36
NDC1-201ENST00000371429 RTCBQ9Y3I0 505 aaKnown RBP17.28■□□□□ 0.36
NDC1-201ENST00000371429 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
NDC1-201ENST00000371429 SERPINC1P01008 464 aa17.27■□□□□ 0.36
NDC1-201ENST00000371429 CCDC192P0DO97 292 aa17.27■□□□□ 0.36
NDC1-201ENST00000371429 MRE11P49959 708 aa17.27■□□□□ 0.36
NDC1-201ENST00000371429 SLC12A7Q9Y666 1083 aa17.27■□□□□ 0.36
NDC1-201ENST00000371429 TRPM2O94759 1503 aa17.27■□□□□ 0.36
NDC1-201ENST00000371429 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.35
NDC1-201ENST00000371429 CCDC83Q8IWF9 413 aa17.27■□□□□ 0.35
NDC1-201ENST00000371429 DCAF5Q96JK2 942 aa17.27■□□□□ 0.35
NDC1-201ENST00000371429 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.35
NDC1-201ENST00000371429 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
NDC1-201ENST00000371429 NBPF14Q5TI25 921 aa17.27■□□□□ 0.35
NDC1-201ENST00000371429 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 MYO1BO43795 1136 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
NDC1-201ENST00000371429 KSR2Q6VAB6 950 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 EYA1Q99502 592 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 CABP5Q9NP86 173 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 HLA-DOAP06340 250 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 FERMT3Q86UX7 667 aa17.26■□□□□ 0.35
NDC1-201ENST00000371429 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
NDC1-201ENST00000371429 IP6K1Q92551 441 aa17.25■□□□□ 0.35
NDC1-201ENST00000371429 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
NDC1-201ENST00000371429 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
NDC1-201ENST00000371429 CEP57L1Q8IYX8 460 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms