RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ADH1CP00326 375 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 NR3C2P08235 984 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 GRM5P41594 1212 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 TMEM259Q4ZIN3 620 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 ATP13A2Q9NQ11 1180 aa5.1□□□□□ -1.59
MCF2-202ENST00000370573 ARID4BQ4LE39 1312 aaPredicted RBP5.09□□□□□ -1.59
MCF2-202ENST00000370573 PTPRTO14522 1441 aa5.09□□□□□ -1.59
MCF2-202ENST00000370573 C11orf95C9JLR9 678 aaPredicted RBP5.09□□□□□ -1.59
MCF2-202ENST00000370573 SMCPP49901 116 aaPredicted RBP5.09□□□□□ -1.59
MCF2-202ENST00000370573 ERFEQ4G0M1 354 aa5.09□□□□□ -1.59
MCF2-202ENST00000370573 VASH1Q7L8A9 365 aaPredicted RBP5.09□□□□□ -1.59
MCF2-202ENST00000370573 TRIM34Q9BYJ4 488 aa5.09□□□□□ -1.59
MCF2-202ENST00000370573 FSHRP23945 695 aa5.09□□□□□ -1.6
MCF2-202ENST00000370573 WDR4P57081 412 aaKnown RBP5.09□□□□□ -1.6
MCF2-202ENST00000370573 PDXDC2PQ6P474 469 aa5.09□□□□□ -1.6
MCF2-202ENST00000370573 ZBTB33Q86T24 672 aa5.09□□□□□ -1.6
MCF2-202ENST00000370573 CDK15Q96Q40 435 aa5.09□□□□□ -1.6
MCF2-202ENST00000370573 OCSTAMPQ9BR26 566 aa5.09□□□□□ -1.6
MCF2-202ENST00000370573 RPRD2Q5VT52 1461 aaKnown RBP5.08□□□□□ -1.6
MCF2-202ENST00000370573 EFCAB6Q5THR3 1501 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 NPATQ14207 1427 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 PPP1R15AO75807 674 aaPredicted RBP5.08□□□□□ -1.6
MCF2-202ENST00000370573 L3MBTL2Q969R5 705 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 SNRKQ9NRH2 765 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 CFAP65Q6ZU64 1925 aaKnown RBP5.08□□□□□ -1.6
MCF2-202ENST00000370573 FOXD4L5Q5VV16 416 aaPredicted RBP5.08□□□□□ -1.6
MCF2-202ENST00000370573 FOXD4L4Q8WXT5 416 aaPredicted RBP5.08□□□□□ -1.6
MCF2-202ENST00000370573 ZNF775Q96BV0 537 aaPredicted RBP5.08□□□□□ -1.6
MCF2-202ENST00000370573 ITPKCQ96DU7 683 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 ZFAND3Q9H8U3 227 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 SERPINA10Q9UK55 444 aa5.08□□□□□ -1.6
MCF2-202ENST00000370573 CAMSAP1Q5T5Y3 1602 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 ARHGAP31Q2M1Z3 1444 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 SNRPBP14678 240 aaKnown RBP5.07□□□□□ -1.6
MCF2-202ENST00000370573 ADAM32Q8TC27 787 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 GJD4Q96KN9 370 aaPredicted RBP5.07□□□□□ -1.6
MCF2-202ENST00000370573 C1QTNF2Q9BXJ5 285 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 TONSLQ96HA7 1378 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 CLTCQ00610 1675 aaKnown RBP5.07□□□□□ -1.6
MCF2-202ENST00000370573 IGSF3O75054 1194 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 ZIC2O95409 532 aaPredicted RBP5.07□□□□□ -1.6
MCF2-202ENST00000370573 TIMP2P16035 220 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 RAB15P59190 212 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 PTK2Q05397 1052 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 MPNDQ8N594 471 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 GPKOWQ92917 476 aaPredicted RBP eCLIP5.07□□□□□ -1.6
MCF2-202ENST00000370573 CCDC97Q96F63 343 aaPredicted RBP5.07□□□□□ -1.6
MCF2-202ENST00000370573 GZF1Q9H116 711 aaPredicted RBP5.07□□□□□ -1.6
MCF2-202ENST00000370573 COG6Q9Y2V7 657 aa5.07□□□□□ -1.6
MCF2-202ENST00000370573 NOS1P29475 1434 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 TRPM2O94759 1503 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 ZC3H13Q5T200 1668 aaKnown RBP5.06□□□□□ -1.6
MCF2-202ENST00000370573 SPHKAPQ2M3C7 1700 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 TRIM46Q7Z4K8 759 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 ZMYM3Q14202 1370 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 CCDC144AA2RUR9 1427 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 UGGT1Q9NYU2 1555 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 NR5A1Q13285 461 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 RGL3Q3MIN7 710 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 MTMR14Q8NCE2 650 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 SLC10A4Q96EP9 437 aa5.06□□□□□ -1.6
MCF2-202ENST00000370573 KLF16Q9BXK1 252 aaPredicted RBP5.06□□□□□ -1.6
MCF2-202ENST00000370573 CLTCL1P53675 1640 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 NBPF8Q3BBV2 869 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 SPATA31E1Q6ZUB1 1445 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 SYNMO15061 1565 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 CNTLNQ9NXG0 1405 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 CEBPAP49715 358 aaPredicted RBP5.05□□□□□ -1.6
MCF2-202ENST00000370573 MFAP1P55081 439 aaKnown RBP5.05□□□□□ -1.6
MCF2-202ENST00000370573 IDI1Q13907 227 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 TRMT44Q8IYL2 757 aaKnown RBP5.05□□□□□ -1.6
MCF2-202ENST00000370573 ZFP42Q96MM3 310 aa5.05□□□□□ -1.6
MCF2-202ENST00000370573 PURBQ96QR8 312 aaKnown RBP5.05□□□□□ -1.6
MCF2-202ENST00000370573 KCTD15Q96SI1 283 aaPredicted RBP5.05□□□□□ -1.6
MCF2-202ENST00000370573 ESF1Q9H501 851 aaKnown RBP5.05□□□□□ -1.6
MCF2-202ENST00000370573 ERVK-7P63135 1459 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 C6orf118Q5T5N4 469 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 DCAF11Q8TEB1 546 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 PREX1Q8TCU6 1659 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 TMCO4Q5TGY1 634 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 CCDC116Q8IYX3 515 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 PNMA1Q8ND90 353 aa5.04□□□□□ -1.6
MCF2-202ENST00000370573 ZC3H4Q9UPT8 1303 aaKnown RBP5.03□□□□□ -1.6
MCF2-202ENST00000370573 PIK3C2BO00750 1634 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 FBXO45P0C2W1 286 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 DZIP3Q86Y13 1208 aaKnown RBP5.03□□□□□ -1.6
MCF2-202ENST00000370573 TRIM47Q96LD4 638 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 SLC52A1Q9NWF4 448 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 MAP4K5Q9Y4K4 846 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 SPATA31D1Q6ZQQ2 1576 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 SOBPA7XYQ1 873 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 CBLBQ13191 982 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 PPP1R26Q5T8A7 1209 aaPredicted RBP5.03□□□□□ -1.6
MCF2-202ENST00000370573 MRPL14Q6P1L8 145 aaKnown RBP5.03□□□□□ -1.6
MCF2-202ENST00000370573 BANK1Q8NDB2 785 aa5.03□□□□□ -1.6
MCF2-202ENST00000370573 ADAMTSL3P82987 1691 aa5.02□□□□□ -1.61
MCF2-202ENST00000370573 FER1L4A9Z1Z3 1794 aa5.02□□□□□ -1.61
MCF2-202ENST00000370573 INTS6LQ5JSJ4 861 aaKnown RBP5.02□□□□□ -1.61
MCF2-202ENST00000370573 SENP2Q9HC62 589 aa5.02□□□□□ -1.61
MCF2-202ENST00000370573 TMPRSS4Q9NRS4 437 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms