RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 OS9Q13438 667 aaPredicted RBP13.22□□□□□ -0.29
TWNK-202ENST00000370228 USP21Q9UK80 565 aa13.22□□□□□ -0.29
TWNK-202ENST00000370228 CCDC172P0C7W6 258 aa13.21□□□□□ -0.29
TWNK-202ENST00000370228 IP6K1Q92551 441 aa13.21□□□□□ -0.29
TWNK-202ENST00000370228 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
TWNK-202ENST00000370228 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
TWNK-202ENST00000370228 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.29
TWNK-202ENST00000370228 PRKAR2BP31323 418 aa13.21□□□□□ -0.3
TWNK-202ENST00000370228 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.3
TWNK-202ENST00000370228 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.3
TWNK-202ENST00000370228 KIF1AQ12756 1690 aa13.21□□□□□ -0.3
TWNK-202ENST00000370228 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.3
TWNK-202ENST00000370228 AFF2P51816 1311 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
TWNK-202ENST00000370228 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
TWNK-202ENST00000370228 MPNDQ8N594 471 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
TWNK-202ENST00000370228 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 INSRP06213 1382 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
TWNK-202ENST00000370228 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
TWNK-202ENST00000370228 LRP6O75581 1613 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 NRKQ7Z2Y5 1582 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
TWNK-202ENST00000370228 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
TWNK-202ENST00000370228 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
TWNK-202ENST00000370228 FLT4P35916 1363 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 APAF1O14727 1248 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 IL13P35225 146 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
TWNK-202ENST00000370228 CHMP5Q9NZZ3 219 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 NSD2O96028 1365 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 ERBB3P21860 1342 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 RNF217Q8TC41 542 aa13.19□□□□□ -0.3
TWNK-202ENST00000370228 GOLIM4O00461 696 aa13.18□□□□□ -0.3
TWNK-202ENST00000370228 PDLIM2Q96JY6 352 aa13.18□□□□□ -0.3
TWNK-202ENST00000370228 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
TWNK-202ENST00000370228 NHSL1Q5SYE7 1610 aa13.18□□□□□ -0.3
TWNK-202ENST00000370228 RBM25P49756 843 aaKnown RBP13.18□□□□□ -0.3
TWNK-202ENST00000370228 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
TWNK-202ENST00000370228 MAP2K1Q02750 393 aaPredicted RBP13.17□□□□□ -0.3
TWNK-202ENST00000370228 RSPH14Q9UHP6 348 aa13.17□□□□□ -0.3
TWNK-202ENST00000370228 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
TWNK-202ENST00000370228 TERF2Q15554 542 aa13.16□□□□□ -0.3
TWNK-202ENST00000370228 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
TWNK-202ENST00000370228 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
TWNK-202ENST00000370228 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
TWNK-202ENST00000370228 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
TWNK-202ENST00000370228 AHDC1Q5TGY3 1603 aaPredicted RBP13.16□□□□□ -0.3
TWNK-202ENST00000370228 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
TWNK-202ENST00000370228 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
TWNK-202ENST00000370228 BCAR3O75815 825 aa13.16□□□□□ -0.3
TWNK-202ENST00000370228 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
TWNK-202ENST00000370228 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
TWNK-202ENST00000370228 PEAK1Q9H792 1746 aa13.15□□□□□ -0.3
TWNK-202ENST00000370228 NFAT5O94916 1531 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
TWNK-202ENST00000370228 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
TWNK-202ENST00000370228 SEC24BO95487 1268 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
TWNK-202ENST00000370228 HMGB1P09429 215 aaKnown RBP13.14□□□□□ -0.31
TWNK-202ENST00000370228 ICE2Q659A1 982 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 ANKRD7Q92527 254 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
TWNK-202ENST00000370228 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 RGPD5Q99666 1765 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 CTR9Q6PD62 1173 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 MCM10Q7L590 875 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 AATKQ6ZMQ8 1374 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
TWNK-202ENST00000370228 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
TWNK-202ENST00000370228 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
TWNK-202ENST00000370228 MPRIPQ6WCQ1 1025 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 LTN1O94822 1766 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 PSMD1Q99460 953 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 WDR17Q8IZU2 1322 aa13.12□□□□□ -0.31
TWNK-202ENST00000370228 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
TWNK-202ENST00000370228 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
TWNK-202ENST00000370228 DONSONQ9NYP3 566 aa13.11□□□□□ -0.31
TWNK-202ENST00000370228 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
TWNK-202ENST00000370228 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
TWNK-202ENST00000370228 POTEAQ6S8J7 498 aa13.11□□□□□ -0.31
TWNK-202ENST00000370228 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
TWNK-202ENST00000370228 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
TWNK-202ENST00000370228 RAD51AP2Q09MP3 1159 aa13.1□□□□□ -0.31
TWNK-202ENST00000370228 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
TWNK-202ENST00000370228 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms