RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
CHTOP-201ENST00000368686 DNM1Q05193 864 aaKnown RBP21.29■■□□□ 1
CHTOP-201ENST00000368686 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.29■■□□□ 1
CHTOP-201ENST00000368686 CLIP2Q9UDT6 1046 aa21.29■■□□□ 1
CHTOP-201ENST00000368686 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
CHTOP-201ENST00000368686 KIAA0232Q92628 1395 aa21.28■■□□□ 1
CHTOP-201ENST00000368686 HAP1P54257 671 aaPredicted RBP21.28■■□□□ 1
CHTOP-201ENST00000368686 CHMP4AQ9BY43 222 aa21.28■■□□□ 1
CHTOP-201ENST00000368686 ZNF446Q9NWS9 450 aa21.28■■□□□ 1
CHTOP-201ENST00000368686 CPSF1Q10570 1443 aaKnown RBP21.27■■□□□ 1
CHTOP-201ENST00000368686 PAXIP1Q6ZW49 1069 aaPredicted RBP21.27■■□□□ 1
CHTOP-201ENST00000368686 AEBP1Q8IUX7 1158 aa21.27■■□□□ 1
CHTOP-201ENST00000368686 PHACTR3Q96KR7 559 aa21.27■■□□□ 1
CHTOP-201ENST00000368686 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.27■■□□□ 1
CHTOP-201ENST00000368686 LIMCH1Q9UPQ0 1083 aa21.27■■□□□ 1
CHTOP-201ENST00000368686 V9GYY5 206 aaPredicted RBP21.27■■□□□ 1
CHTOP-201ENST00000368686 ATP7AQ04656 1500 aa21.27■■□□□ 1
CHTOP-201ENST00000368686 ANO6Q4KMQ2 910 aa21.26■□□□□ 0.99
CHTOP-201ENST00000368686 MEIS3Q99687 375 aa21.26■□□□□ 0.99
CHTOP-201ENST00000368686 TERF2IPQ9NYB0 399 aa21.26■□□□□ 0.99
CHTOP-201ENST00000368686 FRMPD1Q5SYB0 1578 aa21.26■□□□□ 0.99
CHTOP-201ENST00000368686 KIF2AO00139 706 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-201ENST00000368686 H2AFXP16104 143 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-201ENST00000368686 TEX35Q5T0J7 233 aa21.26■□□□□ 0.99
CHTOP-201ENST00000368686 ERBB3P21860 1342 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 ZCCHC11Q5TAX3 1644 aaKnown RBP21.25■□□□□ 0.99
CHTOP-201ENST00000368686 MUM1L1Q5H9M0 696 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 TTC14Q96N46 770 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 PTPRCP08575 1304 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 KIF3BO15066 747 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 LRRC8AQ8IWT6 810 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 TRERF1Q96PN7 1200 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 MTMR6Q9Y217 621 aa21.25■□□□□ 0.99
CHTOP-201ENST00000368686 RIMS2Q9UQ26 1411 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 KIF20BQ96Q89 1820 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 TXLNBQ8N3L3 684 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 TNMDQ9H2S6 317 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 ELP1O95163 1332 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 YY1AP1Q9H869 796 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 FHOD1Q9Y613 1164 aa21.24■□□□□ 0.99
CHTOP-201ENST00000368686 CAMSAP1Q5T5Y3 1602 aa21.23■□□□□ 0.99
CHTOP-201ENST00000368686 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
CHTOP-201ENST00000368686 CCDC144BQ3MJ40 725 aa21.23■□□□□ 0.99
CHTOP-201ENST00000368686 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
CHTOP-201ENST00000368686 DLG5Q8TDM6 1919 aa21.23■□□□□ 0.99
CHTOP-201ENST00000368686 CAVIN2O95810 425 aa21.22■□□□□ 0.99
CHTOP-201ENST00000368686 TNNT3P45378 269 aaPredicted RBP21.22■□□□□ 0.99
CHTOP-201ENST00000368686 AK2P54819 239 aa21.22■□□□□ 0.99
CHTOP-201ENST00000368686 KRT24Q2M2I5 525 aa21.22■□□□□ 0.99
CHTOP-201ENST00000368686 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
CHTOP-201ENST00000368686 KCND1Q9NSA2 647 aa21.22■□□□□ 0.99
CHTOP-201ENST00000368686 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
CHTOP-201ENST00000368686 TSHZ3Q63HK5 1081 aa21.22■□□□□ 0.99
CHTOP-201ENST00000368686 RBM43Q6ZSC3 357 aaKnown RBP21.22■□□□□ 0.99
CHTOP-201ENST00000368686 RPGRIP1LQ68CZ1 1315 aa21.22■□□□□ 0.99
CHTOP-201ENST00000368686 CD163L1Q9NR16 1453 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 USP27XA6NNY8 438 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 SRPK2P78362 688 aaKnown RBP21.21■□□□□ 0.99
CHTOP-201ENST00000368686 KRT85P78386 507 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 RUFY3Q7L099 469 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 TEX2Q8IWB9 1127 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 RASSF4Q9H2L5 321 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 DDX19AQ9NUU7 478 aaKnown RBP21.21■□□□□ 0.99
CHTOP-201ENST00000368686 TPM4P67936 248 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 CAMK4Q16566 473 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 GTF3C6Q969F1 213 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 LRRCC1Q9C099 1032 aa21.21■□□□□ 0.99
CHTOP-201ENST00000368686 CDK12Q9NYV4 1490 aaPredicted RBP21.2■□□□□ 0.99
CHTOP-201ENST00000368686 HMOX1P09601 288 aa21.2■□□□□ 0.98
CHTOP-201ENST00000368686 GJB2P29033 226 aa21.2■□□□□ 0.98
CHTOP-201ENST00000368686 RGS22Q8NE09 1264 aa21.2■□□□□ 0.98
CHTOP-201ENST00000368686 STAP2Q9UGK3 403 aa21.2■□□□□ 0.98
CHTOP-201ENST00000368686 PNMA6AP0CW24 399 aaPredicted RBP21.2■□□□□ 0.98
CHTOP-201ENST00000368686 ZNF165P49910 485 aa21.2■□□□□ 0.98
CHTOP-201ENST00000368686 SARM1Q6SZW1 724 aa21.2■□□□□ 0.98
CHTOP-201ENST00000368686 SKILP12757 684 aa21.19■□□□□ 0.98
CHTOP-201ENST00000368686 LIG1P18858 919 aa21.19■□□□□ 0.98
CHTOP-201ENST00000368686 TTC6Q86TZ1 520 aa21.19■□□□□ 0.98
CHTOP-201ENST00000368686 MRFAP1L1Q96HT8 127 aa21.19■□□□□ 0.98
CHTOP-201ENST00000368686 SNX14Q9Y5W7 946 aa21.19■□□□□ 0.98
CHTOP-201ENST00000368686 AOX1Q06278 1338 aa21.19■□□□□ 0.98
CHTOP-201ENST00000368686 CKAP2LQ8IYA6 745 aa21.18■□□□□ 0.98
CHTOP-201ENST00000368686 L2HGDHQ9H9P8 463 aa21.18■□□□□ 0.98
CHTOP-201ENST00000368686 CLCN6P51797 869 aa21.18■□□□□ 0.98
CHTOP-201ENST00000368686 CCAR2Q8N163 923 aaKnown RBP21.18■□□□□ 0.98
CHTOP-201ENST00000368686 ABCC3O15438 1527 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 PLA2G4AP47712 749 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 CTR9Q6PD62 1173 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 CLSTN2Q9H4D0 955 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 DACT1Q9NYF0 836 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 RSPH14Q9UHP6 348 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
CHTOP-201ENST00000368686 ARGLU1Q9NWB6 273 aaPredicted RBP21.16■□□□□ 0.98
CHTOP-201ENST00000368686 VPS37CA5D8V6 355 aaPredicted RBP21.16■□□□□ 0.98
CHTOP-201ENST00000368686 CHRM1P11229 460 aaPredicted RBP21.16■□□□□ 0.98
CHTOP-201ENST00000368686 CERS3Q8IU89 383 aa21.16■□□□□ 0.98
CHTOP-201ENST00000368686 ZSCAN31Q96LW9 406 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms