RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PDCL3Q9H2J4 239 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 XIRP1Q702N8 1843 aaKnown RBP11.06□□□□□ -0.64
TOP1-201ENST00000361337 IBTKQ9P2D0 1353 aaPredicted RBP11.06□□□□□ -0.64
TOP1-201ENST00000361337 UQCRHLA0A096LP55 91 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 UQCRHP07919 91 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
TOP1-201ENST00000361337 PTMSP20962 102 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
TOP1-201ENST00000361337 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 DCTPP1Q9H773 170 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 TSHZ3Q63HK5 1081 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 ZNF853P0CG23 659 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
TOP1-201ENST00000361337 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
TOP1-201ENST00000361337 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
TOP1-201ENST00000361337 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
TOP1-201ENST00000361337 PDLIM2Q96JY6 352 aa11.05□□□□□ -0.64
TOP1-201ENST00000361337 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
TOP1-201ENST00000361337 NOL7Q9UMY1 257 aaKnown RBP11.05□□□□□ -0.64
TOP1-201ENST00000361337 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
TOP1-201ENST00000361337 SIPA1L3O60292 1781 aaPredicted RBP11.04□□□□□ -0.64
TOP1-201ENST00000361337 NUCB2P80303 420 aa11.04□□□□□ -0.64
TOP1-201ENST00000361337 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
TOP1-201ENST00000361337 IFT57Q9NWB7 429 aa11.04□□□□□ -0.64
TOP1-201ENST00000361337 CGNQ9P2M7 1197 aaKnown RBP11.04□□□□□ -0.64
TOP1-201ENST00000361337 C8orf37Q96NL8 207 aa11.04□□□□□ -0.64
TOP1-201ENST00000361337 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
TOP1-201ENST00000361337 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.04□□□□□ -0.64
TOP1-201ENST00000361337 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 IL13P35225 146 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 MEIS3Q99687 375 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 TRPM3Q9HCF6 1732 aaPredicted RBP11.03□□□□□ -0.64
TOP1-201ENST00000361337 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
TOP1-201ENST00000361337 PDIA4P13667 645 aaKnown RBP11.03□□□□□ -0.64
TOP1-201ENST00000361337 HOXC9P31274 260 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
TOP1-201ENST00000361337 ATP10DQ9P241 1426 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
TOP1-201ENST00000361337 BTBD11A6QL63 1104 aa11.02□□□□□ -0.64
TOP1-201ENST00000361337 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.64
TOP1-201ENST00000361337 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.64
TOP1-201ENST00000361337 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.64
TOP1-201ENST00000361337 CEP85Q6P2H3 762 aa11.02□□□□□ -0.64
TOP1-201ENST00000361337 NPHP3Q7Z494 1330 aa11.02□□□□□ -0.64
TOP1-201ENST00000361337 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
TOP1-201ENST00000361337 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.65
TOP1-201ENST00000361337 CABP4P57796 275 aa11.02□□□□□ -0.65
TOP1-201ENST00000361337 ACSBG1Q96GR2 724 aa11.02□□□□□ -0.65
TOP1-201ENST00000361337 GDPD2Q9HCC8 539 aa11.02□□□□□ -0.65
TOP1-201ENST00000361337 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 ZNF500O60304 480 aaPredicted RBP11.01□□□□□ -0.65
TOP1-201ENST00000361337 ANKRD44Q8N8A2 993 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
TOP1-201ENST00000361337 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 PALD1Q9ULE6 856 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
TOP1-201ENST00000361337 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
TOP1-201ENST00000361337 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
TOP1-201ENST00000361337 TSC1Q92574 1164 aa11□□□□□ -0.65
TOP1-201ENST00000361337 BTG4Q9NY30 223 aa11□□□□□ -0.65
TOP1-201ENST00000361337 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
TOP1-201ENST00000361337 RGS12O14924 1447 aa11□□□□□ -0.65
TOP1-201ENST00000361337 ST18O60284 1047 aa11□□□□□ -0.65
TOP1-201ENST00000361337 NEK4P51957 841 aa11□□□□□ -0.65
TOP1-201ENST00000361337 FAM182BQ5T319 152 aa11□□□□□ -0.65
TOP1-201ENST00000361337 TMX3Q96JJ7 454 aa11□□□□□ -0.65
TOP1-201ENST00000361337 DTNBO60941 627 aa10.99□□□□□ -0.65
TOP1-201ENST00000361337 RIC3Q7Z5B4 369 aa10.99□□□□□ -0.65
TOP1-201ENST00000361337 ZNF830Q96NB3 372 aaPredicted RBP10.99□□□□□ -0.65
TOP1-201ENST00000361337 FGD1P98174 961 aa10.99□□□□□ -0.65
TOP1-201ENST00000361337 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
TOP1-201ENST00000361337 NAP1L2Q9ULW6 460 aaPredicted RBP10.99□□□□□ -0.65
TOP1-201ENST00000361337 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
TOP1-201ENST00000361337 RTL1A6NKG5 1358 aa10.98□□□□□ -0.65
TOP1-201ENST00000361337 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
TOP1-201ENST00000361337 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
TOP1-201ENST00000361337 HS1BP3Q53T59 392 aa10.98□□□□□ -0.65
TOP1-201ENST00000361337 DRC7Q8IY82 874 aa10.98□□□□□ -0.65
TOP1-201ENST00000361337 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
TOP1-201ENST00000361337 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
TOP1-201ENST00000361337 ERICH4A6NGS2 130 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 EXOC6BQ9Y2D4 811 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 ERC2O15083 957 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 TOM1O60784 492 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 UPF3BQ9BZI7 483 aaKnown RBP10.97□□□□□ -0.65
TOP1-201ENST00000361337 G2E3Q7L622 706 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 PRDM4Q9UKN5 801 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
TOP1-201ENST00000361337 KCNQ3O43525 872 aa10.96□□□□□ -0.65
TOP1-201ENST00000361337 ZNF592Q92610 1267 aa10.96□□□□□ -0.65
TOP1-201ENST00000361337 IL25Q9H293 177 aa10.96□□□□□ -0.65
TOP1-201ENST00000361337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
TOP1-201ENST00000361337 MST1RQ04912 1400 aa10.96□□□□□ -0.65
TOP1-201ENST00000361337 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms