RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 C16orf71Q8IYS4 520 aaPredicted RBP9.93□□□□□ -0.82
CCL28-201ENST00000361115 NLGN2Q8NFZ4 835 aa9.93□□□□□ -0.82
CCL28-201ENST00000361115 ACSBG1Q96GR2 724 aa9.93□□□□□ -0.82
CCL28-201ENST00000361115 PDGFDQ9GZP0 370 aaPredicted RBP9.93□□□□□ -0.82
CCL28-201ENST00000361115 ZBTB7CA1YPR0 619 aa9.93□□□□□ -0.82
CCL28-201ENST00000361115 PTF1AQ7RTS3 328 aa9.93□□□□□ -0.82
CCL28-201ENST00000361115 NME9Q86XW9 330 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 DNAJC5GQ8N7S2 189 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 LTBP3Q9NS15 1303 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 SCN11AQ9UI33 1791 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 AAMPQ13685 434 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 AMOTQ4VCS5 1084 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 RRAGDQ9NQL2 400 aaPredicted RBP9.92□□□□□ -0.82
CCL28-201ENST00000361115 SCN4AP35499 1836 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 SCN7AQ01118 1682 aa9.92□□□□□ -0.82
CCL28-201ENST00000361115 SOGA3Q5TF21 947 aa9.91□□□□□ -0.82
CCL28-201ENST00000361115 TMF1P82094 1093 aa9.91□□□□□ -0.82
CCL28-201ENST00000361115 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
CCL28-201ENST00000361115 PRDM10Q9NQV6 1147 aa9.91□□□□□ -0.82
CCL28-201ENST00000361115 SBF1O95248 1867 aa9.91□□□□□ -0.82
CCL28-201ENST00000361115 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
CCL28-201ENST00000361115 EP400Q96L91 3159 aa9.9□□□□□ -0.82
CCL28-201ENST00000361115 CDCA7LQ96GN5 454 aa9.9□□□□□ -0.82
CCL28-201ENST00000361115 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
CCL28-201ENST00000361115 UBR2Q8IWV8 1755 aa9.9□□□□□ -0.82
CCL28-201ENST00000361115 RPS6KA4O75676 772 aa9.89□□□□□ -0.83
CCL28-201ENST00000361115 N4BP2Q86UW6 1770 aaPredicted RBP9.89□□□□□ -0.83
CCL28-201ENST00000361115 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
CCL28-201ENST00000361115 TMOD3Q9NYL9 352 aa9.89□□□□□ -0.83
CCL28-201ENST00000361115 RTCBQ9Y3I0 505 aaKnown RBP9.89□□□□□ -0.83
CCL28-201ENST00000361115 PARP3Q9Y6F1 533 aa9.89□□□□□ -0.83
CCL28-201ENST00000361115 DDX54Q8TDD1 881 aaKnown RBP9.88□□□□□ -0.83
CCL28-201ENST00000361115 VIRMAQ69YN4 1812 aaKnown RBP9.88□□□□□ -0.83
CCL28-201ENST00000361115 LOC102724428A0A0B4J2F2 783 aa9.88□□□□□ -0.83
CCL28-201ENST00000361115 SIK1P57059 783 aa9.88□□□□□ -0.83
CCL28-201ENST00000361115 POTEDQ86YR6 584 aa9.88□□□□□ -0.83
CCL28-201ENST00000361115 PIM2Q9P1W9 311 aa9.88□□□□□ -0.83
CCL28-201ENST00000361115 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
CCL28-201ENST00000361115 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
CCL28-201ENST00000361115 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
CCL28-201ENST00000361115 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
CCL28-201ENST00000361115 A0A087WZG4 1122 aa9.87□□□□□ -0.83
CCL28-201ENST00000361115 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
CCL28-201ENST00000361115 SAMD1Q6SPF0 538 aaPredicted RBP9.87□□□□□ -0.83
CCL28-201ENST00000361115 TESK2Q96S53 571 aa9.87□□□□□ -0.83
CCL28-201ENST00000361115 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
CCL28-201ENST00000361115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
CCL28-201ENST00000361115 C20orf194Q5TEA3 1177 aa9.86□□□□□ -0.83
CCL28-201ENST00000361115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCL28-201ENST00000361115 RIC1Q4ADV7 1423 aa9.86□□□□□ -0.83
CCL28-201ENST00000361115 MYBBP1AQ9BQG0 1328 aaKnown RBP9.85□□□□□ -0.83
CCL28-201ENST00000361115 SLC34A2O95436 690 aa9.85□□□□□ -0.83
CCL28-201ENST00000361115 DALRD3Q5D0E6 543 aaKnown RBP9.85□□□□□ -0.83
CCL28-201ENST00000361115 FAM161AQ3B820 660 aa9.85□□□□□ -0.83
CCL28-201ENST00000361115 NBPF6Q5VWK0 638 aa9.85□□□□□ -0.83
CCL28-201ENST00000361115 NBPF4Q96M43 638 aa9.85□□□□□ -0.83
CCL28-201ENST00000361115 ADAMTSL1Q8N6G6 1762 aa9.84□□□□□ -0.83
CCL28-201ENST00000361115 FER1L6Q2WGJ9 1857 aa9.84□□□□□ -0.83
CCL28-201ENST00000361115 PHKG2P15735 406 aa9.84□□□□□ -0.83
CCL28-201ENST00000361115 PLEKHO1Q53GL0 409 aaPredicted RBP9.84□□□□□ -0.83
CCL28-201ENST00000361115 GLIPR1L2Q4G1C9 344 aa9.83□□□□□ -0.84
CCL28-201ENST00000361115 SYTL4Q96C24 671 aaPredicted RBP9.83□□□□□ -0.84
CCL28-201ENST00000361115 FYB1O15117 783 aa9.83□□□□□ -0.84
CCL28-201ENST00000361115 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
CCL28-201ENST00000361115 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
CCL28-201ENST00000361115 AFDNP55196 1824 aaKnown RBP9.83□□□□□ -0.84
CCL28-201ENST00000361115 CYP27B1O15528 508 aa9.82□□□□□ -0.84
CCL28-201ENST00000361115 LINC00116Q8NCU8 138 aa9.82□□□□□ -0.84
CCL28-201ENST00000361115 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
CCL28-201ENST00000361115 LMNB1P20700 586 aa9.82□□□□□ -0.84
CCL28-201ENST00000361115 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
CCL28-201ENST00000361115 PIGBQ92521 554 aa9.82□□□□□ -0.84
CCL28-201ENST00000361115 TEX13AQ9BXU3 409 aaPredicted RBP9.82□□□□□ -0.84
CCL28-201ENST00000361115 SLC12A5Q9H2X9 1139 aa9.82□□□□□ -0.84
CCL28-201ENST00000361115 MMP10P09238 476 aa9.81□□□□□ -0.84
CCL28-201ENST00000361115 RALBP1Q15311 655 aa9.81□□□□□ -0.84
CCL28-201ENST00000361115 GLTPD2A6NH11 291 aa9.81□□□□□ -0.84
CCL28-201ENST00000361115 NAP1L5Q96NT1 182 aaPredicted RBP9.81□□□□□ -0.84
CCL28-201ENST00000361115 SIPA1L3O60292 1781 aaPredicted RBP9.81□□□□□ -0.84
CCL28-201ENST00000361115 GNPATO15228 680 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 RFC4P35249 363 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 RGS3P49796 1198 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 IBTKQ9P2D0 1353 aaPredicted RBP9.8□□□□□ -0.84
CCL28-201ENST00000361115 KCPQ6ZWJ8 1503 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 IQCA1LA6NCM1 817 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 CENPQQ7L2Z9 268 aaPredicted RBP9.8□□□□□ -0.84
CCL28-201ENST00000361115 FCHSD2O94868 740 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 GYS1P13807 737 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 C9orf131Q5VYM1 1079 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 VPS33BQ9H267 617 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
CCL28-201ENST00000361115 TM4SF1P30408 202 aa9.79□□□□□ -0.84
CCL28-201ENST00000361115 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
CCL28-201ENST00000361115 HSP90AA2PQ14568 343 aaPredicted RBP9.79□□□□□ -0.84
CCL28-201ENST00000361115 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
CCL28-201ENST00000361115 CA12O43570 354 aa9.78□□□□□ -0.84
CCL28-201ENST00000361115 CTCFP49711 727 aaPredicted RBP9.78□□□□□ -0.84
CCL28-201ENST00000361115 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms