RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 SHANK3Q9BYB0 1731 aa15.35■□□□□ 0.05
UBA3-202ENST00000361055 AFF2P51816 1311 aa15.34■□□□□ 0.05
UBA3-202ENST00000361055 ZCRB1Q8TBF4 217 aaKnown RBP15.34■□□□□ 0.05
UBA3-202ENST00000361055 CDCA7Q9BWT1 371 aaPredicted RBP15.34■□□□□ 0.05
UBA3-202ENST00000361055 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
UBA3-202ENST00000361055 LRRC37A3O60309 1634 aa15.34■□□□□ 0.05
UBA3-202ENST00000361055 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
UBA3-202ENST00000361055 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
UBA3-202ENST00000361055 PCDH11XQ9BZA7 1347 aa15.33■□□□□ 0.04
UBA3-202ENST00000361055 PCDH11YQ9BZA8 1340 aa15.33■□□□□ 0.04
UBA3-202ENST00000361055 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
UBA3-202ENST00000361055 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
UBA3-202ENST00000361055 PHKG2P15735 406 aa15.32■□□□□ 0.04
UBA3-202ENST00000361055 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
UBA3-202ENST00000361055 ADAMTS7Q9UKP4 1686 aa15.32■□□□□ 0.04
UBA3-202ENST00000361055 CEMIPQ8WUJ3 1361 aa15.32■□□□□ 0.04
UBA3-202ENST00000361055 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
UBA3-202ENST00000361055 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
UBA3-202ENST00000361055 RRAGDQ9NQL2 400 aaPredicted RBP15.32■□□□□ 0.04
UBA3-202ENST00000361055 CLEC17AQ6ZS10 378 aa15.31■□□□□ 0.04
UBA3-202ENST00000361055 CHL1O00533 1208 aa15.31■□□□□ 0.04
UBA3-202ENST00000361055 CYP27B1O15528 508 aa15.31■□□□□ 0.04
UBA3-202ENST00000361055 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
UBA3-202ENST00000361055 HSP90AA1P07900 732 aaKnown RBP15.3■□□□□ 0.04
UBA3-202ENST00000361055 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
UBA3-202ENST00000361055 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
UBA3-202ENST00000361055 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
UBA3-202ENST00000361055 RNMTO43148 476 aaKnown RBP15.29■□□□□ 0.04
UBA3-202ENST00000361055 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
UBA3-202ENST00000361055 TRPC5Q9UL62 973 aaPredicted RBP15.29■□□□□ 0.04
UBA3-202ENST00000361055 ATRNO75882 1429 aa15.29■□□□□ 0.04
UBA3-202ENST00000361055 EXOC5O00471 708 aa15.29■□□□□ 0.04
UBA3-202ENST00000361055 CD2BP2O95400 341 aaKnown RBP15.29■□□□□ 0.04
UBA3-202ENST00000361055 GSPT1P15170 499 aaKnown RBP15.29■□□□□ 0.04
UBA3-202ENST00000361055 TTC22Q5TAA0 569 aa15.29■□□□□ 0.04
UBA3-202ENST00000361055 TNS2Q63HR2 1409 aa15.28■□□□□ 0.04
UBA3-202ENST00000361055 RABEP1Q15276 862 aa15.28■□□□□ 0.04
UBA3-202ENST00000361055 DCAF5Q96JK2 942 aa15.28■□□□□ 0.04
UBA3-202ENST00000361055 PANK2Q9BZ23 570 aa15.28■□□□□ 0.04
UBA3-202ENST00000361055 SIPA1L3O60292 1781 aaPredicted RBP15.28■□□□□ 0.04
UBA3-202ENST00000361055 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
UBA3-202ENST00000361055 GJD4Q96KN9 370 aaPredicted RBP15.28■□□□□ 0.04
UBA3-202ENST00000361055 PTPRCP08575 1304 aa15.28■□□□□ 0.04
UBA3-202ENST00000361055 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.04
UBA3-202ENST00000361055 GLI3P10071 1580 aa15.27■□□□□ 0.04
UBA3-202ENST00000361055 DDB1Q16531 1140 aa15.27■□□□□ 0.04
UBA3-202ENST00000361055 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
UBA3-202ENST00000361055 TEFQ10587 303 aa15.26■□□□□ 0.03
UBA3-202ENST00000361055 NKX1-1Q15270 411 aaPredicted RBP15.26■□□□□ 0.03
UBA3-202ENST00000361055 TAF7Q15545 349 aaPredicted RBP15.26■□□□□ 0.03
UBA3-202ENST00000361055 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
UBA3-202ENST00000361055 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
UBA3-202ENST00000361055 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
UBA3-202ENST00000361055 QTRT2Q9H974 415 aaKnown RBP15.25■□□□□ 0.03
UBA3-202ENST00000361055 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
UBA3-202ENST00000361055 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
UBA3-202ENST00000361055 CLCN1P35523 988 aa15.25■□□□□ 0.03
UBA3-202ENST00000361055 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
UBA3-202ENST00000361055 CEP85Q6P2H3 762 aa15.25■□□□□ 0.03
UBA3-202ENST00000361055 ARXQ96QS3 562 aa15.25■□□□□ 0.03
UBA3-202ENST00000361055 MRC1P22897 1456 aa15.24■□□□□ 0.03
UBA3-202ENST00000361055 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
UBA3-202ENST00000361055 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
UBA3-202ENST00000361055 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
UBA3-202ENST00000361055 RGS12O14924 1447 aa15.24■□□□□ 0.03
UBA3-202ENST00000361055 SLC52A2Q9HAB3 445 aa15.24■□□□□ 0.03
UBA3-202ENST00000361055 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
UBA3-202ENST00000361055 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
UBA3-202ENST00000361055 TOGARAM1Q9Y4F4 1720 aa15.23■□□□□ 0.03
UBA3-202ENST00000361055 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 NUCB2P80303 420 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 MIS18AQ9NYP9 233 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 ONECUT3O60422 494 aaPredicted RBP15.22■□□□□ 0.03
UBA3-202ENST00000361055 SSFA2P28290 1259 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 GAS2L3Q86XJ1 694 aa15.22■□□□□ 0.03
UBA3-202ENST00000361055 CWC22Q9HCG8 908 aaKnown RBP15.22■□□□□ 0.03
UBA3-202ENST00000361055 A0A0G2JS52 829 aa15.21■□□□□ 0.03
UBA3-202ENST00000361055 SDSP20132 328 aa15.21■□□□□ 0.03
UBA3-202ENST00000361055 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
UBA3-202ENST00000361055 ITGB4P16144 1822 aa15.21■□□□□ 0.03
UBA3-202ENST00000361055 HMMRO75330 724 aa15.21■□□□□ 0.02
UBA3-202ENST00000361055 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.02
UBA3-202ENST00000361055 CABP4P57796 275 aa15.21■□□□□ 0.02
UBA3-202ENST00000361055 KRT24Q2M2I5 525 aa15.21■□□□□ 0.02
UBA3-202ENST00000361055 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.02
UBA3-202ENST00000361055 KAT6BQ8WYB5 2073 aa15.2■□□□□ 0.02
UBA3-202ENST00000361055 KLHL40Q2TBA0 621 aa15.2■□□□□ 0.02
UBA3-202ENST00000361055 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
UBA3-202ENST00000361055 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
UBA3-202ENST00000361055 IBTKQ9P2D0 1353 aaPredicted RBP15.19■□□□□ 0.02
UBA3-202ENST00000361055 REC8O95072 547 aa15.19■□□□□ 0.02
UBA3-202ENST00000361055 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
UBA3-202ENST00000361055 MEIS3Q99687 375 aa15.19■□□□□ 0.02
UBA3-202ENST00000361055 DOT1LQ8TEK3 1739 aa15.19■□□□□ 0.02
UBA3-202ENST00000361055 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
UBA3-202ENST00000361055 CCT4P50991 539 aaKnown RBP15.18■□□□□ 0.02
UBA3-202ENST00000361055 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
UBA3-202ENST00000361055 ST18O60284 1047 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms