RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 AK7Q96M32 723 aa11.81□□□□□ -0.52
SIN3A-201ENST00000360439 SASS6Q6UVJ0 657 aa11.81□□□□□ -0.52
SIN3A-201ENST00000360439 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 A0A1W2PP64 1363 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■■□ 22
SIN3A-201ENST00000360439 CCDC97Q96F63 343 aaPredicted RBP11.8□□□□□ -0.52
SIN3A-201ENST00000360439 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
SIN3A-201ENST00000360439 UBTFL1P0CB47 393 aaPredicted RBP11.8□□□□□ -0.52
SIN3A-201ENST00000360439 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 SNX21Q969T3 373 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 ARHGEF10O15013 1369 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 POLKQ9UBT6 870 aa11.8□□□□□ -0.52
SIN3A-201ENST00000360439 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 SKIDA1Q1XH10 827 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 ARHGAP45Q92619 1136 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 KIF1BO60333 1816 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 EIF4A2Q14240 407 aaKnown RBP11.79□□□□□ -0.52
SIN3A-201ENST00000360439 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
SIN3A-201ENST00000360439 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 BIRC2Q13490 618 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 CPSF2Q9P2I0 782 aaKnown RBP11.78□□□□□ -0.52
SIN3A-201ENST00000360439 ATP6V1DQ9Y5K8 247 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 ROBO2Q9HCK4 1378 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 TRIM27P14373 513 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 HOXC9P31274 260 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 IP6K1Q92551 441 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 DIAPH3Q9NSV4 1193 aa11.78□□□□□ -0.52
SIN3A-201ENST00000360439 CEP152O94986 1710 aa11.77□□□□□ -0.52
SIN3A-201ENST00000360439 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.52
SIN3A-201ENST00000360439 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.52
SIN3A-201ENST00000360439 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.52
SIN3A-201ENST00000360439 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
SIN3A-201ENST00000360439 FLT4P35916 1363 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 PTPRMP28827 1452 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 FAM83GA6ND36 823 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 MBD3O95983 291 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 NUCB1Q02818 461 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 RASSF4Q9H2L5 321 aa11.77□□□□□ -0.53
SIN3A-201ENST00000360439 CALR3Q96L12 384 aaKnown RBP11.77□□□□□ -0.53
SIN3A-201ENST00000360439 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 POLD1P28340 1107 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 CCDC85AQ96PX6 553 aaPredicted RBP11.76□□□□□ -0.53
SIN3A-201ENST00000360439 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
SIN3A-201ENST00000360439 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 NEURL4Q96JN8 1562 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 TMCO5BA8MYB1 307 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
SIN3A-201ENST00000360439 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 MNS1Q8NEH6 495 aa11.76□□□□□ -0.53
SIN3A-201ENST00000360439 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
SIN3A-201ENST00000360439 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
SIN3A-201ENST00000360439 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
SIN3A-201ENST00000360439 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 EYA1Q99502 592 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 CCDC39Q9UFE4 941 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 RPAP2Q8IXW5 612 aaPredicted RBP11.75□□□□□ -0.53
SIN3A-201ENST00000360439 GLI2P10070 1586 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 RFC4P35249 363 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
SIN3A-201ENST00000360439 ZNF500O60304 480 aaPredicted RBP11.75□□□□□ -0.53
SIN3A-201ENST00000360439 RILPL2Q969X0 211 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 CCDC34Q96HJ3 373 aa11.75□□□□□ -0.53
SIN3A-201ENST00000360439 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 OFD1O75665 1012 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 SETBP1Q9Y6X0 1596 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
SIN3A-201ENST00000360439 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
SIN3A-201ENST00000360439 RPAINQ86UA6 219 aa11.73□□□□□ -0.53
SIN3A-201ENST00000360439 SMC5Q8IY18 1101 aa11.73□□□□□ -0.53
SIN3A-201ENST00000360439 GNAI3P08754 354 aa11.73□□□□□ -0.53
SIN3A-201ENST00000360439 MNAT1P51948 309 aa11.73□□□□□ -0.53
SIN3A-201ENST00000360439 NFATC2IPQ8NCF5 419 aa11.73□□□□□ -0.53
SIN3A-201ENST00000360439 SMARCC1Q92922 1105 aaPredicted RBP11.73□□□□□ -0.53
SIN3A-201ENST00000360439 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
SIN3A-201ENST00000360439 CDCA7Q9BWT1 371 aaPredicted RBP11.73□□□□□ -0.53
SIN3A-201ENST00000360439 TRPC5Q9UL62 973 aaPredicted RBP11.73□□□□□ -0.53
SIN3A-201ENST00000360439 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
SIN3A-201ENST00000360439 CCT4P50991 539 aaKnown RBP11.72□□□□□ -0.53
SIN3A-201ENST00000360439 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms