RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 ATP8B2P98198 1209 aa13.81□□□□□ -0.2
CTSE-202ENST00000360218 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
CTSE-202ENST00000360218 LTBP4Q8N2S1 1624 aa13.8□□□□□ -0.2
CTSE-202ENST00000360218 GSPT1P15170 499 aaKnown RBP13.8□□□□□ -0.2
CTSE-202ENST00000360218 PDIA6Q15084 440 aa13.8□□□□□ -0.2
CTSE-202ENST00000360218 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
CTSE-202ENST00000360218 ZNF496Q96IT1 587 aaPredicted RBP13.8□□□□□ -0.2
CTSE-202ENST00000360218 CARD10Q9BWT7 1032 aa13.8□□□□□ -0.2
CTSE-202ENST00000360218 EXOC6BQ9Y2D4 811 aa13.8□□□□□ -0.2
CTSE-202ENST00000360218 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
CTSE-202ENST00000360218 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
CTSE-202ENST00000360218 CABP4P57796 275 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
CTSE-202ENST00000360218 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
CTSE-202ENST00000360218 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 UBR2Q8IWV8 1755 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 IL2RBP14784 551 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 EVA1CP58658 441 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 COL14A1Q05707 1796 aaKnown RBP13.79□□□□□ -0.2
CTSE-202ENST00000360218 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTSE-202ENST00000360218 HYPKQ9NX55 129 aa13.79□□□□□ -0.2
CTSE-202ENST00000360218 NBPF7P0C2Y1 421 aaPredicted RBP13.78□□□□□ -0.2
CTSE-202ENST00000360218 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
CTSE-202ENST00000360218 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
CTSE-202ENST00000360218 TTC22Q5TAA0 569 aa13.78□□□□□ -0.2
CTSE-202ENST00000360218 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
CTSE-202ENST00000360218 TUBGCP6Q96RT7 1819 aa13.77□□□□□ -0.2
CTSE-202ENST00000360218 MYL6BP14649 208 aa13.77□□□□□ -0.21
CTSE-202ENST00000360218 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
CTSE-202ENST00000360218 DAXXQ9UER7 740 aaPredicted RBP13.77□□□□□ -0.21
CTSE-202ENST00000360218 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
CTSE-202ENST00000360218 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
CTSE-202ENST00000360218 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
CTSE-202ENST00000360218 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
CTSE-202ENST00000360218 SNRPA1P09661 255 aaKnown RBP13.76□□□□□ -0.21
CTSE-202ENST00000360218 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
CTSE-202ENST00000360218 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
CTSE-202ENST00000360218 ARFGEF2Q9Y6D5 1785 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 PHLPP1O60346 1717 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 PIP4K2AP48426 406 aaPredicted RBP13.75□□□□□ -0.21
CTSE-202ENST00000360218 CWF19L2Q2TBE0 894 aaKnown RBP13.75□□□□□ -0.21
CTSE-202ENST00000360218 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
CTSE-202ENST00000360218 SSH3Q8TE77 659 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 AFDNP55196 1824 aaKnown RBP13.75□□□□□ -0.21
CTSE-202ENST00000360218 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 WNK3Q9BYP7 1800 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 CDC45O75419 566 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
CTSE-202ENST00000360218 ALDH1L1O75891 902 aa13.74□□□□□ -0.21
CTSE-202ENST00000360218 DDX58O95786 925 aaKnown RBP13.74□□□□□ -0.21
CTSE-202ENST00000360218 POLA2Q14181 598 aa13.74□□□□□ -0.21
CTSE-202ENST00000360218 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
CTSE-202ENST00000360218 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
CTSE-202ENST00000360218 NBR1Q14596 966 aa13.73□□□□□ -0.21
CTSE-202ENST00000360218 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
CTSE-202ENST00000360218 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
CTSE-202ENST00000360218 SALL3Q9BXA9 1300 aa13.73□□□□□ -0.21
CTSE-202ENST00000360218 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
CTSE-202ENST00000360218 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
CTSE-202ENST00000360218 SDSP20132 328 aa13.72□□□□□ -0.21
CTSE-202ENST00000360218 PDE1AP54750 535 aa13.72□□□□□ -0.21
CTSE-202ENST00000360218 COPS6Q7L5N1 327 aa13.72□□□□□ -0.21
CTSE-202ENST00000360218 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
CTSE-202ENST00000360218 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
CTSE-202ENST00000360218 ITGB4P16144 1822 aa13.72□□□□□ -0.21
CTSE-202ENST00000360218 TSHZ3Q63HK5 1081 aa13.71□□□□□ -0.21
CTSE-202ENST00000360218 DISP2A7MBM2 1401 aa13.71□□□□□ -0.21
CTSE-202ENST00000360218 IGKV5-2P06315 115 aa13.71□□□□□ -0.21
CTSE-202ENST00000360218 BECN1Q14457 450 aa13.71□□□□□ -0.21
CTSE-202ENST00000360218 OSBPL3Q9H4L5 887 aa13.71□□□□□ -0.21
CTSE-202ENST00000360218 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
CTSE-202ENST00000360218 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
CTSE-202ENST00000360218 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 TNS2Q63HR2 1409 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 SUCLG2Q96I99 432 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 MYD88Q99836 296 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 IL1RAPL2Q9NP60 686 aa13.7□□□□□ -0.22
CTSE-202ENST00000360218 UTYO14607 1347 aa13.69□□□□□ -0.22
CTSE-202ENST00000360218 GRM8O00222 908 aa13.69□□□□□ -0.22
CTSE-202ENST00000360218 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
CTSE-202ENST00000360218 NEURL1BA8MQ27 555 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 MX1P20591 662 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 MTX1Q13505 466 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 NBPF26B4DH59 902 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
CTSE-202ENST00000360218 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 NBPF10Q6P3W6 841 aaKnown RBP13.68□□□□□ -0.22
CTSE-202ENST00000360218 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 NBPF15Q8N660 670 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
CTSE-202ENST00000360218 AK9Q5TCS8 1911 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms