RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 SERPINC1P01008 464 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 PDE1AP54750 535 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 ZSCAN30Q86W11 494 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 TARBP1Q13395 1621 aaKnown RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 ARGLU1Q9NWB6 273 aaPredicted RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
SLC6A20-202ENST00000358525 TTLL5Q6EMB2 1281 aa17.25■□□□□ 0.35
SLC6A20-202ENST00000358525 CDKL5O76039 1030 aa17.25■□□□□ 0.35
SLC6A20-202ENST00000358525 PDIA4P13667 645 aaKnown RBP17.25■□□□□ 0.35
SLC6A20-202ENST00000358525 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
SLC6A20-202ENST00000358525 CCDC183Q5T5S1 534 aa17.25■□□□□ 0.35
SLC6A20-202ENST00000358525 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
SLC6A20-202ENST00000358525 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 SMC5Q8IY18 1101 aa17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
SLC6A20-202ENST00000358525 MAP7D2Q96T17 732 aa17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 RBM27Q9P2N5 1060 aaKnown RBP17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 MTERF4Q7Z6M4 381 aaKnown RBP17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 RAI14Q9P0K7 980 aa17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 CEP57L1Q8IYX8 460 aa17.23■□□□□ 0.35
SLC6A20-202ENST00000358525 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 GJB2P29033 226 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 UQCRHLA0A096LP55 91 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 UQCRHP07919 91 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 TXLNAP40222 546 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 UBE3BQ7Z3V4 1068 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 FILIP1LQ4L180 1135 aa17.22■□□□□ 0.35
SLC6A20-202ENST00000358525 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 GUCY1B3Q02153 619 aa17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
SLC6A20-202ENST00000358525 STX6O43752 255 aa17.21■□□□□ 0.34
SLC6A20-202ENST00000358525 TEX35Q5T0J7 233 aa17.21■□□□□ 0.34
SLC6A20-202ENST00000358525 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.34
SLC6A20-202ENST00000358525 ESYT1Q9BSJ8 1104 aa17.21■□□□□ 0.34
SLC6A20-202ENST00000358525 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 SNX21Q969T3 373 aa17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 FLT4P35916 1363 aa17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 ABCF2Q9UG63 623 aa17.2■□□□□ 0.34
SLC6A20-202ENST00000358525 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
SLC6A20-202ENST00000358525 GOLIM4O00461 696 aa17.19■□□□□ 0.34
SLC6A20-202ENST00000358525 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
SLC6A20-202ENST00000358525 CCP110O43303 1012 aa17.19■□□□□ 0.34
SLC6A20-202ENST00000358525 ZBTB7BO15156 539 aaPredicted RBP17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 PTPRTO14522 1441 aa17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 CCT2P78371 535 aaKnown RBP17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 EYA1Q99502 592 aa17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 HMGB1P09429 215 aaKnown RBP17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 LRRC59Q96AG4 307 aaKnown RBP17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
SLC6A20-202ENST00000358525 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 SLC39A6Q13433 755 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 CCDC112Q8NEF3 446 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 PIBF1Q8WXW3 757 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 TFIP11Q9UBB9 837 aaKnown RBP17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 DACH1Q9UI36 760 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 INSRP06213 1382 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 GPTP24298 496 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 IL13P35225 146 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 ZSCAN23Q3MJ62 389 aa17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 MAGEC2Q9UBF1 373 aaPredicted RBP17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
SLC6A20-202ENST00000358525 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 SNRKQ9NRH2 765 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 KDM5CP41229 1560 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 EPS15P42566 896 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 MSH6P52701 1360 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 AKAP4Q5JQC9 854 aa17.16■□□□□ 0.34
SLC6A20-202ENST00000358525 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms