RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 RIMS1Q86UR5 1692 aaKnown RBP28.52■■■□□ 2.16
NPAS3-203ENST00000357798 ATP6V1DQ9Y5K8 247 aa28.51■■■□□ 2.16
NPAS3-203ENST00000357798 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.15
NPAS3-203ENST00000357798 TTC12Q9H892 705 aaPredicted RBP28.51■■■□□ 2.15
NPAS3-203ENST00000357798 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.51■■■□□ 2.15
NPAS3-203ENST00000357798 CCDC30Q5VVM6 783 aa28.5■■■□□ 2.15
NPAS3-203ENST00000357798 MAP3K19Q56UN5 1328 aa28.5■■■□□ 2.15
NPAS3-203ENST00000357798 STX6O43752 255 aa28.5■■■□□ 2.15
NPAS3-203ENST00000357798 LRRFIP2Q9Y608 721 aaKnown RBP28.5■■■□□ 2.15
NPAS3-203ENST00000357798 SOS1Q07889 1333 aaPredicted RBP28.5■■■□□ 2.15
NPAS3-203ENST00000357798 FUCA2Q9BTY2 467 aa28.5■■■□□ 2.15
NPAS3-203ENST00000357798 AGLP35573 1532 aa28.5■■■□□ 2.15
NPAS3-203ENST00000357798 ZNF710Q8N1W2 664 aa28.49■■■□□ 2.15
NPAS3-203ENST00000357798 SNX14Q9Y5W7 946 aa28.49■■■□□ 2.15
NPAS3-203ENST00000357798 SGSM2O43147 1006 aa28.49■■■□□ 2.15
NPAS3-203ENST00000357798 FOXO3O43524 673 aa28.49■■■□□ 2.15
NPAS3-203ENST00000357798 F13A1P00488 732 aa28.49■■■□□ 2.15
NPAS3-203ENST00000357798 RAB11FIP3O75154 756 aa28.48■■■□□ 2.15
NPAS3-203ENST00000357798 LIMCH1Q9UPQ0 1083 aa28.48■■■□□ 2.15
NPAS3-203ENST00000357798 SYT1P21579 422 aa28.48■■■□□ 2.15
NPAS3-203ENST00000357798 ARID3AQ99856 593 aa28.48■■■□□ 2.15
NPAS3-203ENST00000357798 KDRP35968 1356 aa28.48■■■□□ 2.15
NPAS3-203ENST00000357798 TPM3P06753 285 aa28.47■■■□□ 2.15
NPAS3-203ENST00000357798 MPNDQ8N594 471 aa28.47■■■□□ 2.15
NPAS3-203ENST00000357798 SSH3Q8TE77 659 aa28.47■■■□□ 2.15
NPAS3-203ENST00000357798 USP6P35125 1406 aa28.46■■■□□ 2.15
NPAS3-203ENST00000357798 AK2P54819 239 aa28.46■■■□□ 2.15
NPAS3-203ENST00000357798 KIF3AQ9Y496 699 aa28.46■■■□□ 2.15
NPAS3-203ENST00000357798 CRYBG1Q9Y4K1 1723 aa28.46■■■□□ 2.15
NPAS3-203ENST00000357798 LSG1Q9H089 658 aaKnown RBP28.45■■■□□ 2.15
NPAS3-203ENST00000357798 UTP14CQ5TAP6 766 aaKnown RBP28.45■■■□□ 2.14
NPAS3-203ENST00000357798 SMC3Q9UQE7 1217 aa28.45■■■□□ 2.14
NPAS3-203ENST00000357798 HTATSF1O43719 755 aaKnown RBP28.45■■■□□ 2.14
NPAS3-203ENST00000357798 RUFY3Q7L099 469 aa28.44■■■□□ 2.14
NPAS3-203ENST00000357798 PI4K2BQ8TCG2 481 aa28.44■■■□□ 2.14
NPAS3-203ENST00000357798 ACEP12821 1306 aa28.44■■■□□ 2.14
NPAS3-203ENST00000357798 IL1RAPL2Q9NP60 686 aa28.44■■■□□ 2.14
NPAS3-203ENST00000357798 C17orf53Q8N3J3 647 aaPredicted RBP28.43■■■□□ 2.14
NPAS3-203ENST00000357798 USP44Q9H0E7 712 aa28.43■■■□□ 2.14
NPAS3-203ENST00000357798 PLEKHG3A1L390 1219 aa28.43■■■□□ 2.14
NPAS3-203ENST00000357798 UBTFL1P0CB47 393 aaPredicted RBP28.43■■■□□ 2.14
NPAS3-203ENST00000357798 NUTM1Q86Y26 1132 aa28.42■■■□□ 2.14
NPAS3-203ENST00000357798 FIBPO43427 364 aa28.42■■■□□ 2.14
NPAS3-203ENST00000357798 ZBTB7CA1YPR0 619 aa28.41■■■□□ 2.14
NPAS3-203ENST00000357798 KIAA1524Q8TCG1 905 aa28.41■■■□□ 2.14
NPAS3-203ENST00000357798 JARID2Q92833 1246 aaPredicted RBP28.41■■■□□ 2.14
NPAS3-203ENST00000357798 DMTNQ08495 405 aa28.41■■■□□ 2.14
NPAS3-203ENST00000357798 POLA2Q14181 598 aa28.41■■■□□ 2.14
NPAS3-203ENST00000357798 CNTROBQ8N137 903 aa28.41■■■□□ 2.14
NPAS3-203ENST00000357798 RASEFQ8IZ41 740 aa28.4■■■□□ 2.14
NPAS3-203ENST00000357798 TSC1Q92574 1164 aa28.4■■■□□ 2.14
NPAS3-203ENST00000357798 DIAPH3Q9NSV4 1193 aa28.4■■■□□ 2.14
NPAS3-203ENST00000357798 SBNO1A3KN83 1393 aa28.4■■■□□ 2.14
NPAS3-203ENST00000357798 FLT4P35916 1363 aa28.4■■■□□ 2.14
NPAS3-203ENST00000357798 GIMAP6Q6P9H5 292 aa28.39■■■□□ 2.14
NPAS3-203ENST00000357798 IGSF1Q8N6C5 1336 aa28.38■■■□□ 2.13
NPAS3-203ENST00000357798 RHPN1Q8TCX5 695 aa28.38■■■□□ 2.13
NPAS3-203ENST00000357798 CEP170BQ9Y4F5 1589 aaPredicted RBP28.38■■■□□ 2.13
NPAS3-203ENST00000357798 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.38■■■□□ 2.13
NPAS3-203ENST00000357798 GOLGA6L6A8MZA4 724 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 KIF1BPQ96EK5 621 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 BCL2L12Q9HB09 334 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 MAP3K5Q99683 1374 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 SURF6O75683 361 aaKnown RBP28.37■■■□□ 2.13
NPAS3-203ENST00000357798 MAP4K4O95819 1239 aaPredicted RBP28.37■■■□□ 2.13
NPAS3-203ENST00000357798 KCNF1Q9H3M0 494 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 PRDM10Q9NQV6 1147 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 MTMR6Q9Y217 621 aa28.37■■■□□ 2.13
NPAS3-203ENST00000357798 AP5Z1O43299 807 aa28.36■■■□□ 2.13
NPAS3-203ENST00000357798 CHAF1AQ13111 956 aaPredicted RBP28.36■■■□□ 2.13
NPAS3-203ENST00000357798 ZSCAN31Q96LW9 406 aaPredicted RBP28.36■■■□□ 2.13
NPAS3-203ENST00000357798 HYPKQ9NX55 129 aa28.36■■■□□ 2.13
NPAS3-203ENST00000357798 ROBO2Q9HCK4 1378 aa28.36■■■□□ 2.13
NPAS3-203ENST00000357798 ZSCAN20P17040 1043 aaPredicted RBP28.35■■■□□ 2.13
NPAS3-203ENST00000357798 PPP1R42Q7Z4L9 355 aa28.35■■■□□ 2.13
NPAS3-203ENST00000357798 SH2B1Q9NRF2 756 aaPredicted RBP28.35■■■□□ 2.13
NPAS3-203ENST00000357798 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
NPAS3-203ENST00000357798 USP42Q9H9J4 1324 aaKnown RBP28.35■■■□□ 2.13
NPAS3-203ENST00000357798 CCDC192P0DO97 292 aa28.34■■■□□ 2.13
NPAS3-203ENST00000357798 GJB2P29033 226 aa28.34■■■□□ 2.13
NPAS3-203ENST00000357798 DNM1Q05193 864 aaKnown RBP28.34■■■□□ 2.13
NPAS3-203ENST00000357798 PYCARDQ9ULZ3 195 aa28.34■■■□□ 2.13
NPAS3-203ENST00000357798 CASTP20810 708 aaKnown RBP28.33■■■□□ 2.13
NPAS3-203ENST00000357798 HDGFP51858 240 aaKnown RBP28.33■■■□□ 2.13
NPAS3-203ENST00000357798 VPS53Q5VIR6 699 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 OSCARQ8IYS5 282 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 CHD2O14647 1828 aaKnown RBP28.33■■■□□ 2.13
NPAS3-203ENST00000357798 TTC21AQ8NDW8 1320 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 LARGE1O95461 756 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 PLCB2Q00722 1185 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 NECTIN2Q92692 538 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 TPRNQ4KMQ1 711 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 EYA1Q99502 592 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 TM6SF1Q9BZW5 370 aa28.33■■■□□ 2.13
NPAS3-203ENST00000357798 PPP4R3BQ5MIZ7 849 aa28.32■■■□□ 2.12
NPAS3-203ENST00000357798 GNAT3A8MTJ3 354 aa28.32■■■□□ 2.12
NPAS3-203ENST00000357798 CCDC83Q8IWF9 413 aa28.32■■■□□ 2.12
NPAS3-203ENST00000357798 LARP6Q9BRS8 491 aaKnown RBP28.32■■■□□ 2.12
NPAS3-203ENST00000357798 KCNB2Q92953 911 aa28.31■■■□□ 2.12
NPAS3-203ENST00000357798 TTC41PQ6P2S7 1318 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms