RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PRPF40BQ6NWY9 871 aaKnown RBP14.57□□□□□ -0.08
COLCA1-201ENST00000355430 BLOC1S2Q6QNY1 142 aa14.57□□□□□ -0.08
COLCA1-201ENST00000355430 CEP126Q9P2H0 1117 aa14.57□□□□□ -0.08
COLCA1-201ENST00000355430 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
COLCA1-201ENST00000355430 CAMK4Q16566 473 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 KIF1BPQ96EK5 621 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 ARHGEF5Q12774 1597 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 VAMP4O75379 141 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 GOLGA6L1Q8N7Z2 621 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 KDM5AP29375 1690 aaKnown RBP14.56□□□□□ -0.08
COLCA1-201ENST00000355430 ZSCAN25Q6NSZ9 544 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 PES1O00541 588 aaKnown RBP14.56□□□□□ -0.08
COLCA1-201ENST00000355430 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 ZSCAN29Q8IWY8 852 aaPredicted RBP14.56□□□□□ -0.08
COLCA1-201ENST00000355430 TMX3Q96JJ7 454 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 SMC2O95347 1197 aa14.56□□□□□ -0.08
COLCA1-201ENST00000355430 SLAIN2Q9P270 581 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 ANKIB1Q9P2G1 1089 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 PAXIP1Q6ZW49 1069 aaPredicted RBP14.55□□□□□ -0.08
COLCA1-201ENST00000355430 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 NACAP1Q9BZK3 213 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 FLIIQ13045 1269 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 CABLES1Q8TDN4 633 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 ACSBG1Q96GR2 724 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
COLCA1-201ENST00000355430 LRSAM1Q6UWE0 723 aa14.54□□□□□ -0.08
COLCA1-201ENST00000355430 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
COLCA1-201ENST00000355430 MNS1Q8NEH6 495 aa14.54□□□□□ -0.08
COLCA1-201ENST00000355430 PHACTR3Q96KR7 559 aa14.54□□□□□ -0.08
COLCA1-201ENST00000355430 RBM25P49756 843 aaKnown RBP14.54□□□□□ -0.08
COLCA1-201ENST00000355430 TRMT2AQ8IZ69 625 aaKnown RBP14.54□□□□□ -0.08
COLCA1-201ENST00000355430 UBE2Q2Q8WVN8 375 aa14.54□□□□□ -0.08
COLCA1-201ENST00000355430 ZNF396Q96N95 335 aaPredicted RBP14.54□□□□□ -0.08
COLCA1-201ENST00000355430 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 MAP3K11Q16584 847 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 CAVIN4Q5BKX8 364 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 PPP1R42Q7Z4L9 355 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 PLEKHM2Q8IWE5 1019 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 STK32BQ9NY57 414 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 ZNF622Q969S3 477 aaKnown RBP eCLIP14.53□□□□□ -0.08
COLCA1-201ENST00000355430 BTG4Q9NY30 223 aa14.53□□□□□ -0.08
COLCA1-201ENST00000355430 ZBTB7BO15156 539 aaPredicted RBP14.53□□□□□ -0.08
COLCA1-201ENST00000355430 GLRX3O76003 335 aaKnown RBP14.52□□□□□ -0.08
COLCA1-201ENST00000355430 ATP6V1AP38606 617 aa14.52□□□□□ -0.08
COLCA1-201ENST00000355430 TFCP2L1Q9NZI6 479 aa14.52□□□□□ -0.08
COLCA1-201ENST00000355430 ZNF521Q96K83 1311 aa14.52□□□□□ -0.08
COLCA1-201ENST00000355430 LIMCH1Q9UPQ0 1083 aa14.52□□□□□ -0.08
COLCA1-201ENST00000355430 PDE1AP54750 535 aa14.52□□□□□ -0.09
COLCA1-201ENST00000355430 PDCL3Q9H2J4 239 aa14.52□□□□□ -0.09
COLCA1-201ENST00000355430 HYPKQ9NX55 129 aa14.52□□□□□ -0.09
COLCA1-201ENST00000355430 SAFBQ15424 915 aaKnown RBP eCLIP14.52□□□□□ -0.09
COLCA1-201ENST00000355430 ZGPATQ8N5A5 531 aaKnown RBP14.52□□□□□ -0.09
COLCA1-201ENST00000355430 HOOK1Q9UJC3 728 aaKnown RBP14.52□□□□□ -0.09
COLCA1-201ENST00000355430 CHD1O14646 1710 aa14.52□□□□□ -0.09
COLCA1-201ENST00000355430 TPM1P09493 284 aa14.52□□□□□ -0.09
COLCA1-201ENST00000355430 CCDC47Q96A33 483 aaKnown RBP14.52□□□□□ -0.09
COLCA1-201ENST00000355430 DCTPP1Q9H773 170 aa14.52□□□□□ -0.09
COLCA1-201ENST00000355430 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
COLCA1-201ENST00000355430 XBP1P17861 261 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 PRIM1P49642 420 aaKnown RBP14.51□□□□□ -0.09
COLCA1-201ENST00000355430 CCDC112Q8NEF3 446 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
COLCA1-201ENST00000355430 BRMS1Q9HCU9 246 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 ARHGEF10O15013 1369 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 ME1P48163 572 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 STK38Q15208 465 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 USP21Q9UK80 565 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 IFIT1P09914 478 aaKnown RBP14.51□□□□□ -0.09
COLCA1-201ENST00000355430 ATP2B2Q01814 1243 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 OLFM4Q6UX06 510 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 PDILTQ8N807 584 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 PTPRTO14522 1441 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 KRT24Q2M2I5 525 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 DDX46Q7L014 1031 aaKnown RBP14.51□□□□□ -0.09
COLCA1-201ENST00000355430 DDX11Q96FC9 970 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 RAI14Q9P0K7 980 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 KDM5DQ9BY66 1539 aa14.51□□□□□ -0.09
COLCA1-201ENST00000355430 SYNMO15061 1565 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 ADCY5O95622 1261 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 TTLL12Q14166 644 aaPredicted RBP14.5□□□□□ -0.09
COLCA1-201ENST00000355430 ARGLU1Q9NWB6 273 aaPredicted RBP14.5□□□□□ -0.09
COLCA1-201ENST00000355430 BAG6P46379 1132 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 CEP85Q6P2H3 762 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 ESYT1Q9BSJ8 1104 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 TMEM2Q9UHN6 1383 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 METTL24Q5JXM2 366 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 TEX35Q5T0J7 233 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 PRDM10Q9NQV6 1147 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 AKAP2Q9Y2D5 859 aa14.5□□□□□ -0.09
COLCA1-201ENST00000355430 STX6O43752 255 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 PRDM15P57071 1507 aaPredicted RBP14.49□□□□□ -0.09
COLCA1-201ENST00000355430 GCP02774 474 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
COLCA1-201ENST00000355430 GJB2P29033 226 aa14.49□□□□□ -0.09
COLCA1-201ENST00000355430 MCM5P33992 734 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms