RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
SMPD4-201ENST00000351288 GBP4Q96PP9 640 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-201ENST00000351288 PALD1Q9ULE6 856 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 CWC27Q6UX04 472 aaKnown RBP12.66□□□□□ -0.38
SMPD4-201ENST00000351288 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
SMPD4-201ENST00000351288 REC8O95072 547 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-201ENST00000351288 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 ST18O60284 1047 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 IL25Q9H293 177 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
SMPD4-201ENST00000351288 GRPEL1Q9HAV7 217 aa12.65□□□□□ -0.38
SMPD4-201ENST00000351288 PTPRCP08575 1304 aa12.65□□□□□ -0.38
SMPD4-201ENST00000351288 DDIT3P35638 169 aa12.65□□□□□ -0.38
SMPD4-201ENST00000351288 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
SMPD4-201ENST00000351288 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
SMPD4-201ENST00000351288 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.39
SMPD4-201ENST00000351288 COPS6Q7L5N1 327 aa12.65□□□□□ -0.39
SMPD4-201ENST00000351288 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.39
SMPD4-201ENST00000351288 C3P01024 1663 aa12.64□□□□□ -0.39
SMPD4-201ENST00000351288 MX1P20591 662 aa12.64□□□□□ -0.39
SMPD4-201ENST00000351288 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
SMPD4-201ENST00000351288 AACSQ86V21 672 aa12.64□□□□□ -0.39
SMPD4-201ENST00000351288 BAG4O95429 457 aaKnown RBP12.64□□□□□ -0.39
SMPD4-201ENST00000351288 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
SMPD4-201ENST00000351288 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
SMPD4-201ENST00000351288 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
SMPD4-201ENST00000351288 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 UBE3BQ7Z3V4 1068 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 TMEM94Q12767 1356 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
SMPD4-201ENST00000351288 RABEP1Q15276 862 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 AKAP4Q5JQC9 854 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 TECPR2O15040 1411 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 ERC2O15083 957 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 FOSBP53539 338 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 BOLA2Q9H3K6 86 aa12.63□□□□□ -0.39
SMPD4-201ENST00000351288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-201ENST00000351288 CPA1P15085 419 aa12.62□□□□□ -0.39
SMPD4-201ENST00000351288 ANP32BQ92688 251 aaKnown RBP12.62□□□□□ -0.39
SMPD4-201ENST00000351288 FSD2A1L4K1 749 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 GPTP24298 496 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 IFNL2Q8IZJ0 200 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 UBR1Q8IWV7 1749 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 MPNDQ8N594 471 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
SMPD4-201ENST00000351288 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-201ENST00000351288 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
SMPD4-201ENST00000351288 USP31Q70CQ4 1352 aa12.6□□□□□ -0.39
SMPD4-201ENST00000351288 A0A087WZG4 1122 aa12.6□□□□□ -0.39
SMPD4-201ENST00000351288 NDUFB9Q9Y6M9 179 aa12.6□□□□□ -0.39
SMPD4-201ENST00000351288 AKAP12Q02952 1782 aa12.6□□□□□ -0.39
SMPD4-201ENST00000351288 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
SMPD4-201ENST00000351288 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-201ENST00000351288 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 GTF2E1P29083 439 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-201ENST00000351288 FAM43AQ8N2R8 423 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 PPFIA3O75145 1194 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 KDM4AO75164 1064 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 ATP8B2P98198 1209 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 KIF13AQ9H1H9 1805 aa12.59□□□□□ -0.39
SMPD4-201ENST00000351288 MRE11P49959 708 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 TMX3Q96JJ7 454 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 SOS1Q07889 1333 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-201ENST00000351288 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-201ENST00000351288 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
SMPD4-201ENST00000351288 RHPN1Q8TCX5 695 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 ACSBG1Q96GR2 724 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 TCEANC2Q96MN5 208 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 ZDHHC9Q9Y397 364 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
SMPD4-201ENST00000351288 NPHP4O75161 1426 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-201ENST00000351288 CHMLP26374 656 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 TRIM44Q96DX7 344 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-201ENST00000351288 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-201ENST00000351288 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 A1BGP04217 495 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 ZNF790Q6PG37 636 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 CNTROBQ8N137 903 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
SMPD4-201ENST00000351288 STK11IPQ8N1F8 1099 aa12.56□□□□□ -0.4
SMPD4-201ENST00000351288 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms