RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
SCARF1-202ENST00000348987 PTPRCP08575 1304 aa22.51■■□□□ 1.19
SCARF1-202ENST00000348987 EYA1Q99502 592 aa22.5■■□□□ 1.19
SCARF1-202ENST00000348987 SSH2Q76I76 1423 aa22.49■■□□□ 1.19
SCARF1-202ENST00000348987 HCLS1P14317 486 aaPredicted RBP22.49■■□□□ 1.19
SCARF1-202ENST00000348987 KCNA6P17658 529 aa22.49■■□□□ 1.19
SCARF1-202ENST00000348987 RIMS1Q86UR5 1692 aaKnown RBP22.49■■□□□ 1.19
SCARF1-202ENST00000348987 HAP1P54257 671 aaPredicted RBP22.49■■□□□ 1.19
SCARF1-202ENST00000348987 PLCB2Q00722 1185 aa22.49■■□□□ 1.19
SCARF1-202ENST00000348987 TSHZ3Q63HK5 1081 aa22.48■■□□□ 1.19
SCARF1-202ENST00000348987 BBXQ8WY36 941 aaPredicted RBP22.48■■□□□ 1.19
SCARF1-202ENST00000348987 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
SCARF1-202ENST00000348987 RIOK3O14730 519 aaKnown RBP22.48■■□□□ 1.19
SCARF1-202ENST00000348987 RTF1Q92541 710 aaKnown RBP22.48■■□□□ 1.19
SCARF1-202ENST00000348987 CUL4AQ13619 759 aa22.47■■□□□ 1.19
SCARF1-202ENST00000348987 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
SCARF1-202ENST00000348987 AMPHP49418 695 aa22.45■■□□□ 1.19
SCARF1-202ENST00000348987 EXOC6BQ9Y2D4 811 aa22.45■■□□□ 1.19
SCARF1-202ENST00000348987 TOPAZ1Q8N9V7 1692 aa22.45■■□□□ 1.18
SCARF1-202ENST00000348987 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
SCARF1-202ENST00000348987 TBX22Q9Y458 520 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 CEP170BQ9Y4F5 1589 aaPredicted RBP22.44■■□□□ 1.18
SCARF1-202ENST00000348987 ARHGEF10O15013 1369 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 FER1L4A9Z1Z3 1794 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 MCM2P49736 904 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 ANKRD7Q92527 254 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 PYCARDQ9ULZ3 195 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 KDM4AO75164 1064 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 KIAA1524Q8TCG1 905 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 DIAPH3Q9NSV4 1193 aa22.44■■□□□ 1.18
SCARF1-202ENST00000348987 FLT4P35916 1363 aa22.43■■□□□ 1.18
SCARF1-202ENST00000348987 CHAF1AQ13111 956 aaPredicted RBP22.43■■□□□ 1.18
SCARF1-202ENST00000348987 CCDC183Q5T5S1 534 aa22.43■■□□□ 1.18
SCARF1-202ENST00000348987 C14orf37Q86TY3 774 aa22.43■■□□□ 1.18
SCARF1-202ENST00000348987 LTV1Q96GA3 475 aaPredicted RBP22.43■■□□□ 1.18
SCARF1-202ENST00000348987 INTS4Q96HW7 963 aaKnown RBP22.43■■□□□ 1.18
SCARF1-202ENST00000348987 NALCNQ8IZF0 1738 aa22.42■■□□□ 1.18
SCARF1-202ENST00000348987 NLRP6P59044 892 aa22.42■■□□□ 1.18
SCARF1-202ENST00000348987 KCNF1Q9H3M0 494 aa22.42■■□□□ 1.18
SCARF1-202ENST00000348987 KDRP35968 1356 aa22.42■■□□□ 1.18
SCARF1-202ENST00000348987 RGPD8O14715 1765 aaPredicted RBP22.42■■□□□ 1.18
SCARF1-202ENST00000348987 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
SCARF1-202ENST00000348987 GTF2E1P29083 439 aaPredicted RBP22.42■■□□□ 1.18
SCARF1-202ENST00000348987 IGSF1Q8N6C5 1336 aa22.41■■□□□ 1.18
SCARF1-202ENST00000348987 PDE1AP54750 535 aa22.41■■□□□ 1.18
SCARF1-202ENST00000348987 AP5Z1O43299 807 aa22.4■■□□□ 1.18
SCARF1-202ENST00000348987 MX1P20591 662 aa22.4■■□□□ 1.18
SCARF1-202ENST00000348987 TTC21AQ8NDW8 1320 aa22.4■■□□□ 1.18
SCARF1-202ENST00000348987 PNMA6EA0A0J9YXQ4 647 aa22.4■■□□□ 1.18
SCARF1-202ENST00000348987 UPF3BQ9BZI7 483 aaKnown RBP22.4■■□□□ 1.18
SCARF1-202ENST00000348987 SPC24Q8NBT2 197 aa22.39■■□□□ 1.18
SCARF1-202ENST00000348987 CNPY2Q9Y2B0 182 aa22.39■■□□□ 1.18
SCARF1-202ENST00000348987 ARHGAP23Q9P227 1491 aa22.39■■□□□ 1.17
SCARF1-202ENST00000348987 HMMRO75330 724 aa22.39■■□□□ 1.17
SCARF1-202ENST00000348987 CCT4P50991 539 aaKnown RBP22.39■■□□□ 1.17
SCARF1-202ENST00000348987 FLIIQ13045 1269 aa22.39■■□□□ 1.17
SCARF1-202ENST00000348987 SLIT1O75093 1534 aa22.38■■□□□ 1.17
SCARF1-202ENST00000348987 WDR33Q9C0J8 1336 aaKnown RBP22.38■■□□□ 1.17
SCARF1-202ENST00000348987 CTIFO43310 598 aaKnown RBP22.38■■□□□ 1.17
SCARF1-202ENST00000348987 ZNF771Q7L3S4 317 aaPredicted RBP22.38■■□□□ 1.17
SCARF1-202ENST00000348987 SRCIN1Q9C0H9 1055 aa22.38■■□□□ 1.17
SCARF1-202ENST00000348987 GNAI2P04899 355 aa22.37■■□□□ 1.17
SCARF1-202ENST00000348987 STK31Q9BXU1 1019 aa22.37■■□□□ 1.17
SCARF1-202ENST00000348987 IL17REQ8NFR9 667 aa22.37■■□□□ 1.17
SCARF1-202ENST00000348987 CGNQ9P2M7 1197 aaKnown RBP22.37■■□□□ 1.17
SCARF1-202ENST00000348987 ESYT1Q9BSJ8 1104 aa22.36■■□□□ 1.17
SCARF1-202ENST00000348987 TCHHQ07283 1943 aa22.36■■□□□ 1.17
SCARF1-202ENST00000348987 GIMAP6Q6P9H5 292 aa22.36■■□□□ 1.17
SCARF1-202ENST00000348987 FEZ1Q99689 392 aa22.36■■□□□ 1.17
SCARF1-202ENST00000348987 ANO2Q9NQ90 1003 aa22.36■■□□□ 1.17
SCARF1-202ENST00000348987 MCCP23508 829 aa22.35■■□□□ 1.17
SCARF1-202ENST00000348987 USHBP1Q8N6Y0 703 aa22.35■■□□□ 1.17
SCARF1-202ENST00000348987 HOXC9P31274 260 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 ABTB2Q8N961 1025 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 OSBPL3Q9H4L5 887 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 OGFRQ9NZT2 677 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 GNAT3A8MTJ3 354 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 TMEM87AQ8NBN3 555 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 TMEM51Q9NW97 253 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 DIP2AQ14689 1571 aa22.34■■□□□ 1.17
SCARF1-202ENST00000348987 NCBP1Q09161 790 aaKnown RBP22.33■■□□□ 1.17
SCARF1-202ENST00000348987 SALL3Q9BXA9 1300 aa22.33■■□□□ 1.16
SCARF1-202ENST00000348987 LRRFIP2Q9Y608 721 aaKnown RBP22.32■■□□□ 1.16
SCARF1-202ENST00000348987 UBE2HP62256 183 aa22.32■■□□□ 1.16
SCARF1-202ENST00000348987 CCDC30Q5VVM6 783 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 FUCA2Q9BTY2 467 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 RPAP1Q9BWH6 1393 aaPredicted RBP22.31■■□□□ 1.16
SCARF1-202ENST00000348987 PIK3C2AO00443 1686 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 ZBTB22O15209 634 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 ANAPC15P60006 121 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 LRRCC1Q9C099 1032 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
SCARF1-202ENST00000348987 FIBPO43427 364 aa22.3■■□□□ 1.16
SCARF1-202ENST00000348987 TAF3Q5VWG9 929 aa22.3■■□□□ 1.16
SCARF1-202ENST00000348987 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
SCARF1-202ENST00000348987 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
SCARF1-202ENST00000348987 RILPL2Q969X0 211 aa22.29■■□□□ 1.16
SCARF1-202ENST00000348987 USP44Q9H0E7 712 aa22.29■■□□□ 1.16
SCARF1-202ENST00000348987 CTNNA3Q9UI47 895 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms