RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TERF2Q15554 542 aa12.38□□□□□ -0.43
CHRNA1-202ENST00000348749 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
CHRNA1-202ENST00000348749 OTUD7AQ8TE49 926 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-202ENST00000348749 MSH6P52701 1360 aa12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 N4BP2Q86UW6 1770 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
CHRNA1-202ENST00000348749 AP5Z1O43299 807 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 KIF18AQ8NI77 898 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 KRT222Q8N1A0 295 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 FAM53CQ9NYF3 392 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 AOX1Q06278 1338 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 CRB1P82279 1406 aa12.36□□□□□ -0.43
CHRNA1-202ENST00000348749 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 PDE1AP54750 535 aa12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 DNAJC2Q99543 621 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
CHRNA1-202ENST00000348749 SALL3Q9BXA9 1300 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 FAM83GA6ND36 823 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 FBLN1P23142 703 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 KCNJ4P48050 445 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 ESYT1Q9BSJ8 1104 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 TULP2O00295 520 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 EIF4A2Q14240 407 aaKnown RBP12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 CALCOCO1Q9P1Z2 691 aa12.34□□□□□ -0.43
CHRNA1-202ENST00000348749 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
CHRNA1-202ENST00000348749 ZBTB22O15209 634 aa12.33□□□□□ -0.44
CHRNA1-202ENST00000348749 MEIS3Q99687 375 aa12.33□□□□□ -0.44
CHRNA1-202ENST00000348749 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
CHRNA1-202ENST00000348749 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 GNAI2P04899 355 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 GNAI3P08754 354 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 ZSCAN22P10073 491 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 ZNF397Q8NF99 534 aaPredicted RBP12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 FMN2Q9NZ56 1722 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 SULT6B1Q6IMI4 303 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 CCDC112Q8NEF3 446 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
CHRNA1-202ENST00000348749 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 TNNT1P13805 278 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 PTGS1P23219 599 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 PALD1Q9ULE6 856 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
CHRNA1-202ENST00000348749 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 LRRCC1Q9C099 1032 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 METP08581 1390 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 XRN1Q8IZH2 1706 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 KDRP35968 1356 aa12.3□□□□□ -0.44
CHRNA1-202ENST00000348749 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-202ENST00000348749 F13A1P00488 732 aa12.29□□□□□ -0.44
CHRNA1-202ENST00000348749 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
CHRNA1-202ENST00000348749 C16orf45Q96MC5 204 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-202ENST00000348749 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
CHRNA1-202ENST00000348749 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-202ENST00000348749 USP6P35125 1406 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 STX6O43752 255 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 CHMLP26374 656 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 STK31Q9BXU1 1019 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
CHRNA1-202ENST00000348749 NAA30Q147X3 362 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-202ENST00000348749 ZSCAN25Q6NSZ9 544 aa12.27□□□□□ -0.44
CHRNA1-202ENST00000348749 MCM10Q7L590 875 aa12.27□□□□□ -0.44
CHRNA1-202ENST00000348749 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.44
CHRNA1-202ENST00000348749 CAPN2P17655 700 aa12.27□□□□□ -0.45
CHRNA1-202ENST00000348749 PLA2G4DQ86XP0 818 aa12.27□□□□□ -0.45
CHRNA1-202ENST00000348749 ANO2Q9NQ90 1003 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms