RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 WWC2Q6AWC2 1192 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 CEP57L1Q8IYX8 460 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 ACBD3Q9H3P7 528 aa21.82■■□□□ 1.08
UBE3C-201ENST00000348165 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
UBE3C-201ENST00000348165 GUCY1B3Q02153 619 aa21.81■■□□□ 1.08
UBE3C-201ENST00000348165 PLCH2O75038 1416 aa21.81■■□□□ 1.08
UBE3C-201ENST00000348165 SNRPA1P09661 255 aaKnown RBP21.81■■□□□ 1.08
UBE3C-201ENST00000348165 GOLIM4O00461 696 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 ZNF213O14771 459 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 ZNF287Q9HBT7 754 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 CWC25Q9NXE8 425 aaPredicted RBP21.8■■□□□ 1.08
UBE3C-201ENST00000348165 ZRANB1Q9UGI0 708 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 FILIP1Q7Z7B0 1213 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 RPGRQ92834 1020 aaKnown RBP21.8■■□□□ 1.08
UBE3C-201ENST00000348165 CAMK4Q16566 473 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 TEX13AQ9BXU3 409 aaPredicted RBP21.8■■□□□ 1.08
UBE3C-201ENST00000348165 DEF6Q9H4E7 631 aa21.8■■□□□ 1.08
UBE3C-201ENST00000348165 HMGB2P26583 209 aaKnown RBP21.79■■□□□ 1.08
UBE3C-201ENST00000348165 FAM177A1Q8N128 213 aaPredicted RBP21.79■■□□□ 1.08
UBE3C-201ENST00000348165 C6orf229H3BNL8 230 aa21.79■■□□□ 1.08
UBE3C-201ENST00000348165 CDR1P51861 262 aa21.79■■□□□ 1.08
UBE3C-201ENST00000348165 SLC39A6Q13433 755 aa21.79■■□□□ 1.08
UBE3C-201ENST00000348165 ANKRD13DQ6ZTN6 518 aa21.79■■□□□ 1.08
UBE3C-201ENST00000348165 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
UBE3C-201ENST00000348165 IGHDP01880 384 aa21.78■■□□□ 1.08
UBE3C-201ENST00000348165 HMGN5P82970 282 aaKnown RBP21.77■■□□□ 1.08
UBE3C-201ENST00000348165 CCP110O43303 1012 aa21.77■■□□□ 1.08
UBE3C-201ENST00000348165 CTCFLQ8NI51 663 aaPredicted RBP21.77■■□□□ 1.08
UBE3C-201ENST00000348165 CWC15Q9P013 229 aaKnown RBP21.77■■□□□ 1.08
UBE3C-201ENST00000348165 SYCE3A1L190 88 aa21.77■■□□□ 1.08
UBE3C-201ENST00000348165 PDIA4P13667 645 aaKnown RBP21.77■■□□□ 1.08
UBE3C-201ENST00000348165 PIK3R4Q99570 1358 aa21.77■■□□□ 1.07
UBE3C-201ENST00000348165 IQCA1Q86XH1 822 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 ZNF444Q8N0Y2 327 aaPredicted RBP21.76■■□□□ 1.07
UBE3C-201ENST00000348165 C8orf76Q96K31 380 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 EVI5LQ96CN4 794 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 SKIDA1Q1XH10 827 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 CHPF2Q9P2E5 772 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 IL16Q14005 1332 aa21.76■■□□□ 1.07
UBE3C-201ENST00000348165 CCT2P78371 535 aaKnown RBP21.76■■□□□ 1.07
UBE3C-201ENST00000348165 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
UBE3C-201ENST00000348165 CCDC196A0A1B0GTZ2 297 aa21.75■■□□□ 1.07
UBE3C-201ENST00000348165 MEIS3Q99687 375 aa21.75■■□□□ 1.07
UBE3C-201ENST00000348165 IFIT3O14879 490 aaKnown RBP21.75■■□□□ 1.07
UBE3C-201ENST00000348165 MAP3K11Q16584 847 aa21.75■■□□□ 1.07
UBE3C-201ENST00000348165 SH2B1Q9NRF2 756 aaPredicted RBP21.75■■□□□ 1.07
UBE3C-201ENST00000348165 TBC1D9Q6ZT07 1266 aa21.75■■□□□ 1.07
UBE3C-201ENST00000348165 LIMCH1Q9UPQ0 1083 aa21.75■■□□□ 1.07
UBE3C-201ENST00000348165 DHX8Q14562 1220 aaKnown RBP21.75■■□□□ 1.07
UBE3C-201ENST00000348165 CABLES1Q8TDN4 633 aa21.74■■□□□ 1.07
UBE3C-201ENST00000348165 SLC12A7Q9Y666 1083 aa21.74■■□□□ 1.07
UBE3C-201ENST00000348165 TTC21AQ8NDW8 1320 aa21.74■■□□□ 1.07
UBE3C-201ENST00000348165 A2MP01023 1474 aa21.74■■□□□ 1.07
UBE3C-201ENST00000348165 HMGB1P09429 215 aaKnown RBP21.74■■□□□ 1.07
UBE3C-201ENST00000348165 ZCRB1Q8TBF4 217 aaKnown RBP21.74■■□□□ 1.07
UBE3C-201ENST00000348165 XAGE3Q8WTP9 111 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 CDC5LQ99459 802 aaKnown RBP21.73■■□□□ 1.07
UBE3C-201ENST00000348165 HAND2P61296 217 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 COPS6Q7L5N1 327 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 CEP131Q9UPN4 1083 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 MSH6P52701 1360 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 CBFA2T2O43439 604 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 EIF4A2Q14240 407 aaKnown RBP21.73■■□□□ 1.07
UBE3C-201ENST00000348165 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
UBE3C-201ENST00000348165 PAF1Q8N7H5 531 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 C8orf58Q8NAV2 365 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 GOLGA8BA8MQT2 603 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 BMP2KLQ5H9B9 411 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 POLKQ9UBT6 870 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 PPIP5K1Q6PFW1 1433 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 PPFIA3O75145 1194 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 LRRC59Q96AG4 307 aaKnown RBP21.72■■□□□ 1.07
UBE3C-201ENST00000348165 NPHP3Q7Z494 1330 aa21.72■■□□□ 1.07
UBE3C-201ENST00000348165 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
UBE3C-201ENST00000348165 TRAPPC8Q9Y2L5 1435 aa21.71■■□□□ 1.07
UBE3C-201ENST00000348165 CCDC96Q2M329 555 aa21.71■■□□□ 1.07
UBE3C-201ENST00000348165 ACSBG1Q96GR2 724 aa21.71■■□□□ 1.07
UBE3C-201ENST00000348165 SCAND2PQ9GZW5 306 aaPredicted RBP21.71■■□□□ 1.07
UBE3C-201ENST00000348165 LUC7LQ9NQ29 371 aaKnown RBP21.71■■□□□ 1.07
UBE3C-201ENST00000348165 DDX46Q7L014 1031 aaKnown RBP21.71■■□□□ 1.07
UBE3C-201ENST00000348165 RHPN1Q8TCX5 695 aa21.71■■□□□ 1.07
UBE3C-201ENST00000348165 RNF41Q9H4P4 317 aaPredicted RBP21.71■■□□□ 1.07
UBE3C-201ENST00000348165 SSFA2P28290 1259 aa21.71■■□□□ 1.07
UBE3C-201ENST00000348165 CFAP100Q494V2 611 aa21.7■■□□□ 1.06
UBE3C-201ENST00000348165 RDXP35241 583 aaKnown RBP21.7■■□□□ 1.06
UBE3C-201ENST00000348165 GOLGA8AA7E2F4 631 aa21.7■■□□□ 1.06
UBE3C-201ENST00000348165 ERCC4Q92889 916 aaPredicted RBP21.7■■□□□ 1.06
UBE3C-201ENST00000348165 RIMS2Q9UQ26 1411 aa21.69■■□□□ 1.06
UBE3C-201ENST00000348165 RFC4P35249 363 aa21.69■■□□□ 1.06
UBE3C-201ENST00000348165 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
UBE3C-201ENST00000348165 KLHL10Q6JEL2 608 aa21.69■■□□□ 1.06
UBE3C-201ENST00000348165 SEPT11Q9NVA2 429 aaKnown RBP21.69■■□□□ 1.06
UBE3C-201ENST00000348165 SYCP2Q9BX26 1530 aa21.69■■□□□ 1.06
UBE3C-201ENST00000348165 EIF5P55010 431 aaKnown RBP21.69■■□□□ 1.06
UBE3C-201ENST00000348165 ESPNB1AK53 854 aa21.69■■□□□ 1.06
UBE3C-201ENST00000348165 SMTNL1A8MU46 457 aa21.68■■□□□ 1.06
UBE3C-201ENST00000348165 SLC4A8Q2Y0W8 1093 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms