RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 KINO60870 393 aaKnown RBP23.22■■□□□ 1.31
SEMA6C-201ENST00000341697 JMYQ8N9B5 988 aa23.22■■□□□ 1.31
SEMA6C-201ENST00000341697 TXLNAP40222 546 aa23.21■■□□□ 1.31
SEMA6C-201ENST00000341697 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
SEMA6C-201ENST00000341697 CHD1O14646 1710 aa23.21■■□□□ 1.31
SEMA6C-201ENST00000341697 DCAF5Q96JK2 942 aa23.21■■□□□ 1.31
SEMA6C-201ENST00000341697 FIBPO43427 364 aa23.21■■□□□ 1.31
SEMA6C-201ENST00000341697 LARP1BQ659C4 914 aaKnown RBP23.21■■□□□ 1.31
SEMA6C-201ENST00000341697 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
SEMA6C-201ENST00000341697 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
SEMA6C-201ENST00000341697 ZNF287Q9HBT7 754 aa23.2■■□□□ 1.3
SEMA6C-201ENST00000341697 ECHDC1Q9NTX5 307 aa23.2■■□□□ 1.3
SEMA6C-201ENST00000341697 DDX46Q7L014 1031 aaKnown RBP23.2■■□□□ 1.3
SEMA6C-201ENST00000341697 DZIP1Q86YF9 867 aaKnown RBP23.2■■□□□ 1.3
SEMA6C-201ENST00000341697 USP5P45974 858 aa23.19■■□□□ 1.3
SEMA6C-201ENST00000341697 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
SEMA6C-201ENST00000341697 CASTP20810 708 aaKnown RBP23.19■■□□□ 1.3
SEMA6C-201ENST00000341697 CDK5RAP3Q96JB5 506 aa23.19■■□□□ 1.3
SEMA6C-201ENST00000341697 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
SEMA6C-201ENST00000341697 ALDH1L1O75891 902 aa23.18■■□□□ 1.3
SEMA6C-201ENST00000341697 LETM1O95202 739 aaPredicted RBP23.18■■□□□ 1.3
SEMA6C-201ENST00000341697 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
SEMA6C-201ENST00000341697 LTKP29376 864 aa23.18■■□□□ 1.3
SEMA6C-201ENST00000341697 CEBPZQ03701 1054 aaKnown RBP23.18■■□□□ 1.3
SEMA6C-201ENST00000341697 MRPL50Q8N5N7 158 aaKnown RBP23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 PRPF40BQ6NWY9 871 aaKnown RBP23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 NAPBQ9H115 298 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 NPC1L1Q9UHC9 1359 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 NBPF6Q5VWK0 638 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 NBPF5PQ86XG9 351 aaPredicted RBP23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 NBPF4Q96M43 638 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 PDE4CQ08493 712 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 SIRT1Q96EB6 747 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
SEMA6C-201ENST00000341697 SBNO1A3KN83 1393 aa23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 EVI5LQ96CN4 794 aa23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 TRAK2O60296 914 aa23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 POLR3DP05423 398 aaPredicted RBP23.16■■□□□ 1.3
SEMA6C-201ENST00000341697 JARID2Q92833 1246 aaPredicted RBP23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 SAMD9LQ8IVG5 1584 aa23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 C6orf229H3BNL8 230 aa23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 CCDC152Q4G0S7 254 aa23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 MINDY4BA8MYZ0 360 aa23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 GCC2Q8IWJ2 1684 aa23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 MEIS3Q99687 375 aa23.15■■□□□ 1.3
SEMA6C-201ENST00000341697 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.3
SEMA6C-201ENST00000341697 MAGI2Q86UL8 1455 aa23.14■■□□□ 1.3
SEMA6C-201ENST00000341697 KRT85P78386 507 aa23.14■■□□□ 1.3
SEMA6C-201ENST00000341697 SLF2Q8IX21 1173 aa23.14■■□□□ 1.3
SEMA6C-201ENST00000341697 CAVIN1Q6NZI2 390 aaKnown RBP23.14■■□□□ 1.29
SEMA6C-201ENST00000341697 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
SEMA6C-201ENST00000341697 NOL7Q9UMY1 257 aaKnown RBP23.14■■□□□ 1.29
SEMA6C-201ENST00000341697 MLH3Q9UHC1 1453 aa23.14■■□□□ 1.29
SEMA6C-201ENST00000341697 TTF1Q15361 905 aaPredicted RBP23.13■■□□□ 1.29
SEMA6C-201ENST00000341697 CFAP65Q6ZU64 1925 aaKnown RBP23.13■■□□□ 1.29
SEMA6C-201ENST00000341697 PDIA4P13667 645 aaKnown RBP23.13■■□□□ 1.29
SEMA6C-201ENST00000341697 ST5P78524 1137 aa23.13■■□□□ 1.29
SEMA6C-201ENST00000341697 WASF1Q92558 559 aa23.13■■□□□ 1.29
SEMA6C-201ENST00000341697 GRM8O00222 908 aa23.13■■□□□ 1.29
SEMA6C-201ENST00000341697 SETDB2Q96T68 719 aa23.12■■□□□ 1.29
SEMA6C-201ENST00000341697 MKNK2Q9HBH9 465 aa23.12■■□□□ 1.29
SEMA6C-201ENST00000341697 PLEKHG3A1L390 1219 aa23.12■■□□□ 1.29
SEMA6C-201ENST00000341697 TTC37Q6PGP7 1564 aa23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 ZCCHC11Q5TAX3 1644 aaKnown RBP23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 VAMP4O75379 141 aa23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 SLAIN2Q9P270 581 aa23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 IL13P35225 146 aa23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 HDAC1Q13547 482 aaPredicted RBP23.11■■□□□ 1.29
SEMA6C-201ENST00000341697 ME1P48163 572 aa23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 RHPN1Q8TCX5 695 aa23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 ZNF219Q9P2Y4 722 aaPredicted RBP23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 GOLIM4O00461 696 aa23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 CIZ1Q9ULV3 898 aaPredicted RBP23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 UPF3BQ9BZI7 483 aaKnown RBP23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 HMGB1P09429 215 aaKnown RBP23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 LINS1Q8NG48 757 aa23.1■■□□□ 1.29
SEMA6C-201ENST00000341697 BMP2KLQ5H9B9 411 aa23.09■■□□□ 1.29
SEMA6C-201ENST00000341697 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
SEMA6C-201ENST00000341697 MPHOSPH10O00566 681 aaKnown RBP23.09■■□□□ 1.29
SEMA6C-201ENST00000341697 ZNF213O14771 459 aa23.09■■□□□ 1.29
SEMA6C-201ENST00000341697 SOS1Q07889 1333 aaPredicted RBP23.09■■□□□ 1.29
SEMA6C-201ENST00000341697 PIP4K2AP48426 406 aaPredicted RBP23.08■■□□□ 1.29
SEMA6C-201ENST00000341697 SKAP1Q86WV1 359 aa23.08■■□□□ 1.29
SEMA6C-201ENST00000341697 TSPYL6Q8N831 410 aa23.08■■□□□ 1.29
SEMA6C-201ENST00000341697 KRT18P05783 430 aaKnown RBP23.08■■□□□ 1.29
SEMA6C-201ENST00000341697 R3HCC1Q9Y3T6 440 aaKnown RBP23.08■■□□□ 1.29
SEMA6C-201ENST00000341697 IGHDP01880 384 aa23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 LDHCP07864 332 aa23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 EPS15P42566 896 aa23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 DZIP3Q86Y13 1208 aaKnown RBP23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 RNF41Q9H4P4 317 aaPredicted RBP23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 SNRKQ9NRH2 765 aa23.08■■□□□ 1.28
SEMA6C-201ENST00000341697 UQCRFS1P1P0C7P4 283 aa23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 ANKRD44Q8N8A2 993 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms