RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
TPM3-207ENST00000341372 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
TPM3-207ENST00000341372 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
TPM3-207ENST00000341372 LY75O60449 1722 aa13.76□□□□□ -0.21
TPM3-207ENST00000341372 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
TPM3-207ENST00000341372 PHKG2P15735 406 aa13.74□□□□□ -0.21
TPM3-207ENST00000341372 AMOTQ4VCS5 1084 aa13.74□□□□□ -0.21
TPM3-207ENST00000341372 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
TPM3-207ENST00000341372 PSEN1P49768 467 aa13.74□□□□□ -0.21
TPM3-207ENST00000341372 RALBP1Q15311 655 aa13.74□□□□□ -0.21
TPM3-207ENST00000341372 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
TPM3-207ENST00000341372 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
TPM3-207ENST00000341372 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
TPM3-207ENST00000341372 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
TPM3-207ENST00000341372 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
TPM3-207ENST00000341372 KDM6AO15550 1401 aaPredicted RBP13.72□□□□□ -0.21
TPM3-207ENST00000341372 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
TPM3-207ENST00000341372 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.21
TPM3-207ENST00000341372 HMOX1P09601 288 aa13.71□□□□□ -0.22
TPM3-207ENST00000341372 TXNRD1Q16881 649 aa13.71□□□□□ -0.22
TPM3-207ENST00000341372 FBXW7Q969H0 707 aa13.71□□□□□ -0.22
TPM3-207ENST00000341372 E9PSI1 815 aa13.7□□□□□ -0.22
TPM3-207ENST00000341372 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
TPM3-207ENST00000341372 PCMTD1Q96MG8 357 aaPredicted RBP13.7□□□□□ -0.22
TPM3-207ENST00000341372 HSP90AB1P08238 724 aaKnown RBP13.69□□□□□ -0.22
TPM3-207ENST00000341372 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
TPM3-207ENST00000341372 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
TPM3-207ENST00000341372 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
TPM3-207ENST00000341372 MRC1P22897 1456 aa13.69□□□□□ -0.22
TPM3-207ENST00000341372 IRF6O14896 467 aa13.69□□□□□ -0.22
TPM3-207ENST00000341372 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
TPM3-207ENST00000341372 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
TPM3-207ENST00000341372 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
TPM3-207ENST00000341372 MYBBP1AQ9BQG0 1328 aaKnown RBP13.69□□□□□ -0.22
TPM3-207ENST00000341372 QSER1Q2KHR3 1735 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 ERVV-2B6SEH9 535 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 SLC27A3Q5K4L6 730 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
TPM3-207ENST00000341372 ANO8Q9HCE9 1232 aaPredicted RBP13.67□□□□□ -0.22
TPM3-207ENST00000341372 ZNF831Q5JPB2 1677 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
TPM3-207ENST00000341372 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 PIGBQ92521 554 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 LRP5O75197 1615 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
TPM3-207ENST00000341372 NBPF14Q5TI25 921 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 LRRC4BQ9NT99 713 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
TPM3-207ENST00000341372 C5P01031 1676 aa13.65□□□□□ -0.22
TPM3-207ENST00000341372 FCHSD2O94868 740 aa13.65□□□□□ -0.22
TPM3-207ENST00000341372 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
TPM3-207ENST00000341372 CICQ96RK0 1608 aaPredicted RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 HSP90B1P14625 803 aaKnown RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 PRKAR2BP31323 418 aa13.64□□□□□ -0.23
TPM3-207ENST00000341372 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.237e-10■■□□□ 13
TPM3-207ENST00000341372 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
TPM3-207ENST00000341372 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
TPM3-207ENST00000341372 MS4A1P11836 297 aa13.64□□□□□ -0.23
TPM3-207ENST00000341372 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 R3HDM1Q15032 1099 aaKnown RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
TPM3-207ENST00000341372 SIPA1L3O60292 1781 aaPredicted RBP13.64□□□□□ -0.23
TPM3-207ENST00000341372 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
TPM3-207ENST00000341372 PSDA5PKW4 1024 aaPredicted RBP13.63□□□□□ -0.23
TPM3-207ENST00000341372 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
TPM3-207ENST00000341372 DPYSL4O14531 572 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 RNMTO43148 476 aaKnown RBP13.61□□□□□ -0.23
TPM3-207ENST00000341372 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
TPM3-207ENST00000341372 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
TPM3-207ENST00000341372 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
TPM3-207ENST00000341372 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
TPM3-207ENST00000341372 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
TPM3-207ENST00000341372 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
TPM3-207ENST00000341372 CABP4P57796 275 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 ZNF827Q17R98 1081 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 PLEKHF1Q96S99 279 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 SLC52A2Q9HAB3 445 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 LGR6Q9HBX8 967 aa13.6□□□□□ -0.23
TPM3-207ENST00000341372 HMGB2P26583 209 aaKnown RBP13.59□□□□□ -0.23
TPM3-207ENST00000341372 LOC102724428A0A0B4J2F2 783 aa13.59□□□□□ -0.23
TPM3-207ENST00000341372 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
TPM3-207ENST00000341372 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
TPM3-207ENST00000341372 SIK1P57059 783 aa13.59□□□□□ -0.23
TPM3-207ENST00000341372 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
TPM3-207ENST00000341372 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
TPM3-207ENST00000341372 KCNQ4P56696 695 aa13.58□□□□□ -0.24
TPM3-207ENST00000341372 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms