RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 CCDC148Q8NFR7 591 aa13.27□□□□□ -0.29
TNC-201ENST00000341037 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
TNC-201ENST00000341037 EIF3JO75822 258 aaKnown RBP13.26□□□□□ -0.29
TNC-201ENST00000341037 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 IL27Q8NEV9 243 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 C8orf76Q96K31 380 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 AMOTQ4VCS5 1084 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 DNA2P51530 1060 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 CTCFLQ8NI51 663 aaPredicted RBP13.26□□□□□ -0.29
TNC-201ENST00000341037 SSH1Q8WYL5 1049 aa13.26□□□□□ -0.29
TNC-201ENST00000341037 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
TNC-201ENST00000341037 GOLGA8AA7E2F4 631 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 GOLGA8BA8MQT2 603 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 FOXO3O43524 673 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 NLRP5P59047 1200 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 PTPN23Q9H3S7 1636 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 CCDC141Q6ZP82 1450 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 NAIPQ13075 1403 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 JARID2Q92833 1246 aaPredicted RBP13.25□□□□□ -0.29
TNC-201ENST00000341037 SPA17Q15506 151 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 DNAAF4Q8WXU2 420 aa13.25□□□□□ -0.29
TNC-201ENST00000341037 PPM1FP49593 454 aaPredicted RBP13.24□□□□□ -0.29
TNC-201ENST00000341037 CCDC178Q5BJE1 867 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 AMOTL2Q9Y2J4 779 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 IFIT3O14879 490 aaKnown RBP13.24□□□□□ -0.29
TNC-201ENST00000341037 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 NGLY1Q96IV0 654 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 CASQ1P31415 396 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 MCM4P33991 863 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
TNC-201ENST00000341037 A0A087WZG4 1122 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 TNNT1P13805 278 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 FBXO31Q5XUX0 539 aaPredicted RBP13.24□□□□□ -0.29
TNC-201ENST00000341037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
TNC-201ENST00000341037 CCDC113Q9H0I3 377 aa13.24□□□□□ -0.29
TNC-201ENST00000341037 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 IQCA1Q86XH1 822 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
TNC-201ENST00000341037 EZRP15311 586 aaKnown RBP13.23□□□□□ -0.29
TNC-201ENST00000341037 RARSP54136 660 aaKnown RBP13.23□□□□□ -0.29
TNC-201ENST00000341037 GOLIM4O00461 696 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 ANAPC15P60006 121 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
TNC-201ENST00000341037 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 CTNNBL1Q8WYA6 563 aaPredicted RBP13.22□□□□□ -0.29
TNC-201ENST00000341037 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 GOLGA6L7A0A1B0GV03 622 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 EXOC5O00471 708 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 CPLX3Q8WVH0 158 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 ERICH4A6NGS2 130 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
TNC-201ENST00000341037 MAGI1Q96QZ7 1491 aaPredicted RBP13.22□□□□□ -0.29
TNC-201ENST00000341037 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
TNC-201ENST00000341037 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
TNC-201ENST00000341037 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
TNC-201ENST00000341037 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
TNC-201ENST00000341037 CCDC194A0A1B0GVG4 234 aa13.21□□□□□ -0.29
TNC-201ENST00000341037 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
TNC-201ENST00000341037 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.29
TNC-201ENST00000341037 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
TNC-201ENST00000341037 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.29
TNC-201ENST00000341037 HAND2P61296 217 aa13.21□□□□□ -0.3
TNC-201ENST00000341037 SLF2Q8IX21 1173 aa13.21□□□□□ -0.3
TNC-201ENST00000341037 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.3
TNC-201ENST00000341037 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.3
TNC-201ENST00000341037 ANO10Q9NW15 660 aa13.21□□□□□ -0.3
TNC-201ENST00000341037 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
TNC-201ENST00000341037 CNNM3Q8NE01 707 aa13.2□□□□□ -0.3
TNC-201ENST00000341037 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
TNC-201ENST00000341037 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
TNC-201ENST00000341037 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
TNC-201ENST00000341037 FEZ1Q99689 392 aa13.2□□□□□ -0.3
TNC-201ENST00000341037 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
TNC-201ENST00000341037 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
TNC-201ENST00000341037 RNF41Q9H4P4 317 aaPredicted RBP13.19□□□□□ -0.3
TNC-201ENST00000341037 MACROD2A1Z1Q3 448 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
TNC-201ENST00000341037 CETN2P41208 172 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 CWC25Q9NXE8 425 aaPredicted RBP13.19□□□□□ -0.3
TNC-201ENST00000341037 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 GJB2P29033 226 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 DYDC1Q8WWB3 177 aa13.19□□□□□ -0.3
TNC-201ENST00000341037 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms