RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 XBP1P17861 261 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 ANAPC15P60006 121 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 PPFIBP1Q86W92 1011 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 NOL7Q9UMY1 257 aaKnown RBP17.41■□□□□ 0.38
RRP1B-201ENST00000340648 TBC1D2BQ9UPU7 963 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
RRP1B-201ENST00000340648 EVA1CP58658 441 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 ECHDC1Q9NTX5 307 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 SART3Q15020 963 aaKnown RBP17.41■□□□□ 0.38
RRP1B-201ENST00000340648 POLKQ9UBT6 870 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 BRMS1Q9HCU9 246 aa17.41■□□□□ 0.38
RRP1B-201ENST00000340648 DNM1Q05193 864 aaKnown RBP17.4■□□□□ 0.38
RRP1B-201ENST00000340648 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
RRP1B-201ENST00000340648 CCDC186Q7Z3E2 898 aa17.4■□□□□ 0.38
RRP1B-201ENST00000340648 FAM177BA6PVY3 158 aa17.4■□□□□ 0.38
RRP1B-201ENST00000340648 RHPN1Q8TCX5 695 aa17.4■□□□□ 0.38
RRP1B-201ENST00000340648 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
RRP1B-201ENST00000340648 FANCAO15360 1455 aa17.4■□□□□ 0.38
RRP1B-201ENST00000340648 KDM5CP41229 1560 aa17.39■□□□□ 0.38
RRP1B-201ENST00000340648 SAMD9Q5K651 1589 aa17.39■□□□□ 0.38
RRP1B-201ENST00000340648 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
RRP1B-201ENST00000340648 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
RRP1B-201ENST00000340648 F13A1P00488 732 aa17.39■□□□□ 0.37
RRP1B-201ENST00000340648 PPFIA3O75145 1194 aa17.39■□□□□ 0.37
RRP1B-201ENST00000340648 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
RRP1B-201ENST00000340648 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 TRAPPC8Q9Y2L5 1435 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 ANO6Q4KMQ2 910 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 TAF3Q5VWG9 929 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 FSIP1Q8NA03 581 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 CCT2P78371 535 aaKnown RBP17.38■□□□□ 0.37
RRP1B-201ENST00000340648 CEP135Q66GS9 1140 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 DACH1Q9UI36 760 aa17.38■□□□□ 0.37
RRP1B-201ENST00000340648 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
RRP1B-201ENST00000340648 FAM200AQ8TCP9 573 aa17.37■□□□□ 0.37
RRP1B-201ENST00000340648 ZRANB1Q9UGI0 708 aa17.37■□□□□ 0.37
RRP1B-201ENST00000340648 PLCH2O75038 1416 aa17.37■□□□□ 0.37
RRP1B-201ENST00000340648 ZNF445P59923 1031 aa17.37■□□□□ 0.37
RRP1B-201ENST00000340648 CTAGE5O15320 804 aa17.37■□□□□ 0.37
RRP1B-201ENST00000340648 A0A1W2PP64 1363 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 BIN1O00499 593 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 STX1AQ16623 288 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 NEMFO60524 1076 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 ERLIN1O75477 346 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 GAS2L3Q86XJ1 694 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 CCDC94Q9BW85 323 aaPredicted RBP17.36■□□□□ 0.37
RRP1B-201ENST00000340648 DACT1Q9NYF0 836 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 POLR3GO15318 223 aaPredicted RBP17.36■□□□□ 0.37
RRP1B-201ENST00000340648 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
RRP1B-201ENST00000340648 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 CEP89Q96ST8 783 aa17.36■□□□□ 0.37
RRP1B-201ENST00000340648 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.37
RRP1B-201ENST00000340648 ANXA1P04083 346 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
RRP1B-201ENST00000340648 CCAR1Q8IX12 1150 aaKnown RBP17.35■□□□□ 0.37
RRP1B-201ENST00000340648 LMBRD1Q9NUN5 540 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 H0YHG0 523 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 MAGI2Q86UL8 1455 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
RRP1B-201ENST00000340648 AK2P54819 239 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
RRP1B-201ENST00000340648 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
RRP1B-201ENST00000340648 ZNF521Q96K83 1311 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
RRP1B-201ENST00000340648 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 PAXBP1Q9Y5B6 917 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
RRP1B-201ENST00000340648 C8orf76Q96K31 380 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 CCDC69A6NI79 296 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 CHMLP26374 656 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 AMOTL1Q8IY63 956 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 TMX1Q9H3N1 280 aa17.34■□□□□ 0.37
RRP1B-201ENST00000340648 DISP1Q96F81 1524 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 CDKL5O76039 1030 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 NUP133Q8WUM0 1156 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 CCDC102AQ96A19 550 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 PIK3R4Q99570 1358 aa17.33■□□□□ 0.37
RRP1B-201ENST00000340648 PTGS1P23219 599 aa17.33■□□□□ 0.36
RRP1B-201ENST00000340648 SNW1Q13573 536 aaKnown RBP17.33■□□□□ 0.36
RRP1B-201ENST00000340648 IMMTQ16891 758 aaKnown RBP17.33■□□□□ 0.36
RRP1B-201ENST00000340648 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
RRP1B-201ENST00000340648 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
RRP1B-201ENST00000340648 MYD88Q99836 296 aa17.33■□□□□ 0.36
RRP1B-201ENST00000340648 MSH6P52701 1360 aa17.33■□□□□ 0.36
RRP1B-201ENST00000340648 FSD2A1L4K1 749 aa17.32■□□□□ 0.36
RRP1B-201ENST00000340648 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
RRP1B-201ENST00000340648 ZSCAN12O43309 604 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms