RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.4
RBFOX1-202ENST00000340209 RGS12O14924 1447 aa12.52□□□□□ -0.41
RBFOX1-202ENST00000340209 CYP27B1O15528 508 aa12.52□□□□□ -0.41
RBFOX1-202ENST00000340209 PHKG2P15735 406 aa12.52□□□□□ -0.41
RBFOX1-202ENST00000340209 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
RBFOX1-202ENST00000340209 LTN1O94822 1766 aa12.51□□□□□ -0.41
RBFOX1-202ENST00000340209 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
RBFOX1-202ENST00000340209 MST1RQ04912 1400 aa12.51□□□□□ -0.41
RBFOX1-202ENST00000340209 DTNBO60941 627 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 MX1P20591 662 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 PDE1AP54750 535 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 RGPD2P0DJD1 1756 aa12.5□□□□□ -0.41
RBFOX1-202ENST00000340209 ATP8B2P98198 1209 aa12.49□□□□□ -0.41
RBFOX1-202ENST00000340209 ATP10DQ9P241 1426 aa12.49□□□□□ -0.41
RBFOX1-202ENST00000340209 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-202ENST00000340209 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-202ENST00000340209 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
RBFOX1-202ENST00000340209 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
RBFOX1-202ENST00000340209 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
RBFOX1-202ENST00000340209 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-202ENST00000340209 A1BGP04217 495 aa12.48□□□□□ -0.41
RBFOX1-202ENST00000340209 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
RBFOX1-202ENST00000340209 NFAT5O94916 1531 aa12.48□□□□□ -0.41
RBFOX1-202ENST00000340209 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
RBFOX1-202ENST00000340209 BEND3Q5T5X7 828 aa12.47□□□□□ -0.41
RBFOX1-202ENST00000340209 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-202ENST00000340209 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-202ENST00000340209 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
RBFOX1-202ENST00000340209 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
RBFOX1-202ENST00000340209 NWD1Q149M9 1564 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 AACSQ86V21 672 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 RHPN1Q8TCX5 695 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 MEGF6O75095 1541 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 SUCLG2Q96I99 432 aa12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 UPF3BQ9BZI7 483 aaKnown RBP12.46□□□□□ -0.41
RBFOX1-202ENST00000340209 KCNJ4P48050 445 aa12.46□□□□□ -0.42
RBFOX1-202ENST00000340209 G3BP1Q13283 466 aaKnown RBP eCLIP12.46□□□□□ -0.42
RBFOX1-202ENST00000340209 CWC27Q6UX04 472 aaKnown RBP12.46□□□□□ -0.42
RBFOX1-202ENST00000340209 HYPKQ9NX55 129 aa12.46□□□□□ -0.42
RBFOX1-202ENST00000340209 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.42
RBFOX1-202ENST00000340209 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
RBFOX1-202ENST00000340209 SNRPA1P09661 255 aaKnown RBP12.45□□□□□ -0.42
RBFOX1-202ENST00000340209 ACSBG1Q96GR2 724 aa12.45□□□□□ -0.42
RBFOX1-202ENST00000340209 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
RBFOX1-202ENST00000340209 IL2RBP14784 551 aa12.45□□□□□ -0.42
RBFOX1-202ENST00000340209 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
RBFOX1-202ENST00000340209 A0A087WZG4 1122 aa12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 ADCY9O60503 1353 aa12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 GRM8O00222 908 aa12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 GPTP24298 496 aa12.44□□□□□ -0.42
RBFOX1-202ENST00000340209 ZNF142P52746 1687 aaPredicted RBP12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 ERC2O15083 957 aa12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 NEK4P51957 841 aa12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 NEUROD6Q96NK8 337 aa12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 BOLA2Q9H3K6 86 aa12.43□□□□□ -0.42
RBFOX1-202ENST00000340209 REC8O95072 547 aa12.42□□□□□ -0.42
RBFOX1-202ENST00000340209 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
RBFOX1-202ENST00000340209 DIAPH3Q9NSV4 1193 aa12.42□□□□□ -0.42
RBFOX1-202ENST00000340209 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
RBFOX1-202ENST00000340209 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
RBFOX1-202ENST00000340209 RGPD5Q99666 1765 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 LINS1Q8NG48 757 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
RBFOX1-202ENST00000340209 KDM6AO15550 1401 aaPredicted RBP12.4□□□□□ -0.42
RBFOX1-202ENST00000340209 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
RBFOX1-202ENST00000340209 MED1Q15648 1581 aaPredicted RBP12.4□□□□□ -0.42
RBFOX1-202ENST00000340209 TLR7Q9NYK1 1049 aaKnown RBP12.4□□□□□ -0.42
RBFOX1-202ENST00000340209 LMTK3Q96Q04 1460 aa12.4□□□□□ -0.43
RBFOX1-202ENST00000340209 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 CHMP5Q9NZZ3 219 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 HOXB7P09629 217 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 MCCP23508 829 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 CPA1P15085 419 aa12.39□□□□□ -0.43
RBFOX1-202ENST00000340209 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms