RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 PSMA5P28066 241 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 AK2P54819 239 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 GUCY1B3Q02153 619 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
SEMA4D-201ENST00000339861 KRT85P78386 507 aa13.21□□□□□ -0.29
SEMA4D-201ENST00000339861 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
SEMA4D-201ENST00000339861 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
SEMA4D-201ENST00000339861 GPT2Q8TD30 523 aa13.21□□□□□ -0.29
SEMA4D-201ENST00000339861 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.3
SEMA4D-201ENST00000339861 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.3
SEMA4D-201ENST00000339861 ZNF853P0CG23 659 aa13.21□□□□□ -0.3
SEMA4D-201ENST00000339861 KLHDC4Q8TBB5 520 aa13.21□□□□□ -0.3
SEMA4D-201ENST00000339861 UHRF1BP1LA0JNW5 1464 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 CREBRFQ8IUR6 639 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 MYD88Q99836 296 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 KCNQ3O43525 872 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 CCDC192P0DO97 292 aa13.2□□□□□ -0.3
SEMA4D-201ENST00000339861 CCDC183Q5T5S1 534 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 ECHDC1Q9NTX5 307 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 SDF4Q9BRK5 362 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 CPLX1O14810 134 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 NRDCO43847 1150 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
SEMA4D-201ENST00000339861 SHROOM2Q13796 1616 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 ZSCAN22P10073 491 aaPredicted RBP13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 LTKP29376 864 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 TNRQ92752 1358 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
SEMA4D-201ENST00000339861 LAMC1P11047 1609 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 SYT1P21579 422 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 IL17REQ8NFR9 667 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 PDCP20941 246 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 TSC1Q92574 1164 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 CCT2P78371 535 aaKnown RBP13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
SEMA4D-201ENST00000339861 KCNA6P17658 529 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 HOXC9P31274 260 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 FLT4P35916 1363 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 IQGAP1P46940 1657 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 FAM135BQ49AJ0 1406 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 ATP2B1P20020 1258 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 ME1P48163 572 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
SEMA4D-201ENST00000339861 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 LETM1O95202 739 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 GLI2P10070 1586 aa13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 ABCC3O15438 1527 aa13.15□□□□□ -0.3
SEMA4D-201ENST00000339861 CEP152O94986 1710 aa13.15□□□□□ -0.31
SEMA4D-201ENST00000339861 ZNF445P59923 1031 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 EDC3Q96F86 508 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 PKNOX2Q96KN3 472 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 ZMYND15Q9H091 742 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 SNX14Q9Y5W7 946 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 OFD1O75665 1012 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 F13A1P00488 732 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 UBE2HP62256 183 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
SEMA4D-201ENST00000339861 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 IQSEC2Q5JU85 1478 aa13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 ANAPC15P60006 121 aa13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 CBX1P83916 185 aa13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 HIP1O00291 1037 aa13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 C16orf45Q96MC5 204 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 PPRC1Q5VV67 1664 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
SEMA4D-201ENST00000339861 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms