RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 BMP2KLQ5H9B9 411 aa23.11■■□□□ 1.29
NELFA-201ENST00000333877 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
NELFA-201ENST00000333877 BCL11AQ9H165 835 aa23.11■■□□□ 1.29
NELFA-201ENST00000333877 KSR2Q6VAB6 950 aa23.1■■□□□ 1.29
NELFA-201ENST00000333877 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
NELFA-201ENST00000333877 UPF2Q9HAU5 1272 aaKnown RBP23.1■■□□□ 1.29
NELFA-201ENST00000333877 MAP3K2Q9Y2U5 619 aa23.1■■□□□ 1.29
NELFA-201ENST00000333877 SHANK3Q9BYB0 1731 aa23.1■■□□□ 1.29
NELFA-201ENST00000333877 SNRPA1P09661 255 aaKnown RBP23.1■■□□□ 1.29
NELFA-201ENST00000333877 COL22A1Q8NFW1 1626 aaPredicted RBP23.1■■□□□ 1.29
NELFA-201ENST00000333877 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
NELFA-201ENST00000333877 COL14A1Q05707 1796 aaKnown RBP23.09■■□□□ 1.29
NELFA-201ENST00000333877 PNMA6EA0A0J9YXQ4 647 aa23.09■■□□□ 1.29
NELFA-201ENST00000333877 PLEKHM2Q8IWE5 1019 aa23.09■■□□□ 1.29
NELFA-201ENST00000333877 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
NELFA-201ENST00000333877 ERVV-2B6SEH9 535 aa23.08■■□□□ 1.29
NELFA-201ENST00000333877 SMARCA5O60264 1052 aaPredicted RBP23.08■■□□□ 1.29
NELFA-201ENST00000333877 AIMP1Q12904 312 aaKnown RBP23.08■■□□□ 1.28
NELFA-201ENST00000333877 USP16Q9Y5T5 823 aa23.08■■□□□ 1.28
NELFA-201ENST00000333877 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
NELFA-201ENST00000333877 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
NELFA-201ENST00000333877 MYL6BP14649 208 aa23.06■■□□□ 1.28
NELFA-201ENST00000333877 ANP32EQ9BTT0 268 aa23.06■■□□□ 1.28
NELFA-201ENST00000333877 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
NELFA-201ENST00000333877 EXOC6BQ9Y2D4 811 aa23.06■■□□□ 1.28
NELFA-201ENST00000333877 COL16A1Q07092 1604 aaPredicted RBP23.05■■□□□ 1.28
NELFA-201ENST00000333877 ALDH1L1O75891 902 aa23.05■■□□□ 1.28
NELFA-201ENST00000333877 OTUD7AQ8TE49 926 aaPredicted RBP23.04■■□□□ 1.28
NELFA-201ENST00000333877 TBC1D32Q96NH3 1257 aa23.04■■□□□ 1.28
NELFA-201ENST00000333877 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
NELFA-201ENST00000333877 MFAP1P55081 439 aaKnown RBP23.03■■□□□ 1.28
NELFA-201ENST00000333877 GLI3P10071 1580 aa23.03■■□□□ 1.28
NELFA-201ENST00000333877 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
NELFA-201ENST00000333877 CWF19L2Q2TBE0 894 aaKnown RBP23.02■■□□□ 1.28
NELFA-201ENST00000333877 SSH3Q8TE77 659 aa23.02■■□□□ 1.28
NELFA-201ENST00000333877 GSPT1P15170 499 aaKnown RBP23.01■■□□□ 1.27
NELFA-201ENST00000333877 COPS6Q7L5N1 327 aa23.01■■□□□ 1.27
NELFA-201ENST00000333877 PPP1R42Q7Z4L9 355 aa23.01■■□□□ 1.27
NELFA-201ENST00000333877 RIC3Q7Z5B4 369 aa23.01■■□□□ 1.27
NELFA-201ENST00000333877 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
NELFA-201ENST00000333877 PIP4K2AP48426 406 aaPredicted RBP23.01■■□□□ 1.27
NELFA-201ENST00000333877 TTC22Q5TAA0 569 aa23.01■■□□□ 1.27
NELFA-201ENST00000333877 LINS1Q8NG48 757 aa23.01■■□□□ 1.27
NELFA-201ENST00000333877 LAMB4A4D0S4 1761 aa23.01■■□□□ 1.27
NELFA-201ENST00000333877 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
NELFA-201ENST00000333877 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
NELFA-201ENST00000333877 UBR2Q8IWV8 1755 aa23■■□□□ 1.27
NELFA-201ENST00000333877 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
NELFA-201ENST00000333877 POLA2Q14181 598 aa22.99■■□□□ 1.27
NELFA-201ENST00000333877 PAPPAQ13219 1627 aa22.99■■□□□ 1.27
NELFA-201ENST00000333877 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
NELFA-201ENST00000333877 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
NELFA-201ENST00000333877 SRGAP3O43295 1099 aa22.98■■□□□ 1.27
NELFA-201ENST00000333877 SLC4A3P48751 1232 aa22.98■■□□□ 1.27
NELFA-201ENST00000333877 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
NELFA-201ENST00000333877 ADAMTS2O95450 1211 aa22.97■■□□□ 1.27
NELFA-201ENST00000333877 C22orf23Q9BZE7 217 aa22.97■■□□□ 1.27
NELFA-201ENST00000333877 KCPQ6ZWJ8 1503 aa22.97■■□□□ 1.27
NELFA-201ENST00000333877 TOM1O60784 492 aa22.97■■□□□ 1.27
NELFA-201ENST00000333877 TBC1D9Q6ZT07 1266 aa22.97■■□□□ 1.27
NELFA-201ENST00000333877 PTCD1O75127 700 aaKnown RBP22.96■■□□□ 1.27
NELFA-201ENST00000333877 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
NELFA-201ENST00000333877 ANKRD13DQ6ZTN6 518 aa22.96■■□□□ 1.27
NELFA-201ENST00000333877 TMOD3Q9NYL9 352 aa22.96■■□□□ 1.27
NELFA-201ENST00000333877 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
NELFA-201ENST00000333877 GRM8O00222 908 aa22.95■■□□□ 1.26
NELFA-201ENST00000333877 CDC45O75419 566 aa22.95■■□□□ 1.26
NELFA-201ENST00000333877 METTL22Q9BUU2 404 aaPredicted RBP22.95■■□□□ 1.26
NELFA-201ENST00000333877 HDAC5Q9UQL6 1122 aa22.95■■□□□ 1.26
NELFA-201ENST00000333877 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
NELFA-201ENST00000333877 SURF6O75683 361 aaKnown RBP22.94■■□□□ 1.26
NELFA-201ENST00000333877 TNS2Q63HR2 1409 aa22.94■■□□□ 1.26
NELFA-201ENST00000333877 MYD88Q99836 296 aa22.94■■□□□ 1.26
NELFA-201ENST00000333877 UTYO14607 1347 aa22.93■■□□□ 1.26
NELFA-201ENST00000333877 ERBB4Q15303 1308 aa22.93■■□□□ 1.26
NELFA-201ENST00000333877 PDE1AP54750 535 aa22.93■■□□□ 1.26
NELFA-201ENST00000333877 OSBPL3Q9H4L5 887 aa22.93■■□□□ 1.26
NELFA-201ENST00000333877 RAB11FIP3O75154 756 aa22.93■■□□□ 1.26
NELFA-201ENST00000333877 MTX1Q13505 466 aa22.93■■□□□ 1.26
NELFA-201ENST00000333877 NEURL1BA8MQ27 555 aa22.92■■□□□ 1.26
NELFA-201ENST00000333877 NBPF26B4DH59 902 aa22.92■■□□□ 1.26
NELFA-201ENST00000333877 NBPF14Q5TI25 921 aa22.92■■□□□ 1.26
NELFA-201ENST00000333877 NBPF10Q6P3W6 841 aaKnown RBP22.92■■□□□ 1.26
NELFA-201ENST00000333877 NBPF15Q8N660 670 aa22.92■■□□□ 1.26
NELFA-201ENST00000333877 SALL3Q9BXA9 1300 aa22.92■■□□□ 1.26
NELFA-201ENST00000333877 NUTM2BA6NNL0 878 aaPredicted RBP22.92■■□□□ 1.26
NELFA-201ENST00000333877 NUTM2EB1AL46 878 aaPredicted RBP22.92■■□□□ 1.26
NELFA-201ENST00000333877 NUTM2AQ8IVF1 878 aaPredicted RBP22.92■■□□□ 1.26
NELFA-201ENST00000333877 EXOC5O00471 708 aa22.91■■□□□ 1.26
NELFA-201ENST00000333877 SDSP20132 328 aa22.91■■□□□ 1.26
NELFA-201ENST00000333877 PIGBQ92521 554 aa22.91■■□□□ 1.26
NELFA-201ENST00000333877 SUCLG2Q96I99 432 aa22.9■■□□□ 1.26
NELFA-201ENST00000333877 A1BGP04217 495 aa22.9■■□□□ 1.26
NELFA-201ENST00000333877 GCKRQ14397 625 aa22.9■■□□□ 1.26
NELFA-201ENST00000333877 WNK3Q9BYP7 1800 aa22.9■■□□□ 1.26
NELFA-201ENST00000333877 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.26
NELFA-201ENST00000333877 MX1P20591 662 aa22.89■■□□□ 1.26
NELFA-201ENST00000333877 PLBD2Q8NHP8 589 aa22.89■■□□□ 1.26
NELFA-201ENST00000333877 IL1RAPL2Q9NP60 686 aa22.89■■□□□ 1.26
NELFA-201ENST00000333877 ITGB4P16144 1822 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms