RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 LRRC37A3O60309 1634 aa23.26■■□□□ 1.31
LAMP1-201ENST00000332556 IBTKQ9P2D0 1353 aaPredicted RBP23.26■■□□□ 1.31
LAMP1-201ENST00000332556 NEK4P51957 841 aa23.26■■□□□ 1.31
LAMP1-201ENST00000332556 LARP6Q9BRS8 491 aaKnown RBP23.26■■□□□ 1.31
LAMP1-201ENST00000332556 CHD2O14647 1828 aaKnown RBP23.25■■□□□ 1.31
LAMP1-201ENST00000332556 MCTP1Q6DN14 999 aa23.25■■□□□ 1.31
LAMP1-201ENST00000332556 KRT28Q7Z3Y7 464 aa23.25■■□□□ 1.31
LAMP1-201ENST00000332556 UPF3BQ9BZI7 483 aaKnown RBP23.25■■□□□ 1.31
LAMP1-201ENST00000332556 PA2G4Q9UQ80 394 aaKnown RBP23.25■■□□□ 1.31
LAMP1-201ENST00000332556 NFAT5O94916 1531 aa23.25■■□□□ 1.31
LAMP1-201ENST00000332556 CEMIPQ8WUJ3 1361 aa23.25■■□□□ 1.31
LAMP1-201ENST00000332556 FOXD4L6Q3SYB3 417 aaPredicted RBP23.25■■□□□ 1.31
LAMP1-201ENST00000332556 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
LAMP1-201ENST00000332556 FOXD4L3Q6VB84 417 aaPredicted RBP23.25■■□□□ 1.31
LAMP1-201ENST00000332556 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
LAMP1-201ENST00000332556 GOLGA6L22H0YM25 854 aa23.24■■□□□ 1.31
LAMP1-201ENST00000332556 DNAAF4Q8WXU2 420 aa23.24■■□□□ 1.31
LAMP1-201ENST00000332556 RNMTO43148 476 aaKnown RBP23.24■■□□□ 1.31
LAMP1-201ENST00000332556 JARID2Q92833 1246 aaPredicted RBP23.24■■□□□ 1.31
LAMP1-201ENST00000332556 ESYT1Q9BSJ8 1104 aa23.24■■□□□ 1.31
LAMP1-201ENST00000332556 REC8O95072 547 aa23.23■■□□□ 1.31
LAMP1-201ENST00000332556 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
LAMP1-201ENST00000332556 KCNH5Q8NCM2 988 aa23.23■■□□□ 1.31
LAMP1-201ENST00000332556 BEND3Q5T5X7 828 aa23.23■■□□□ 1.31
LAMP1-201ENST00000332556 MAP3K2Q9Y2U5 619 aa23.23■■□□□ 1.31
LAMP1-201ENST00000332556 ADGRL3Q9HAR2 1447 aa23.23■■□□□ 1.31
LAMP1-201ENST00000332556 CHMLP26374 656 aa23.22■■□□□ 1.31
LAMP1-201ENST00000332556 AKAP4Q5JQC9 854 aa23.22■■□□□ 1.31
LAMP1-201ENST00000332556 OSBPL3Q9H4L5 887 aa23.22■■□□□ 1.31
LAMP1-201ENST00000332556 CHRNA2Q15822 529 aa23.22■■□□□ 1.31
LAMP1-201ENST00000332556 CAVIN1Q6NZI2 390 aaKnown RBP23.21■■□□□ 1.31
LAMP1-201ENST00000332556 ADCY9O60503 1353 aa23.2■■□□□ 1.31
LAMP1-201ENST00000332556 MYL6BP14649 208 aa23.2■■□□□ 1.3
LAMP1-201ENST00000332556 OS9Q13438 667 aaPredicted RBP23.2■■□□□ 1.3
LAMP1-201ENST00000332556 TPRNQ4KMQ1 711 aa23.2■■□□□ 1.3
LAMP1-201ENST00000332556 RHPN1Q8TCX5 695 aa23.2■■□□□ 1.3
LAMP1-201ENST00000332556 NLRP2Q9NX02 1062 aa23.2■■□□□ 1.3
LAMP1-201ENST00000332556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
LAMP1-201ENST00000332556 KLHL40Q2TBA0 621 aa23.2■■□□□ 1.3
LAMP1-201ENST00000332556 VSIG10Q8N0Z9 540 aa23.2■■□□□ 1.3
LAMP1-201ENST00000332556 SSH3Q8TE77 659 aa23.19■■□□□ 1.3
LAMP1-201ENST00000332556 PTMSP20962 102 aa23.19■■□□□ 1.3
LAMP1-201ENST00000332556 ST18O60284 1047 aa23.18■■□□□ 1.3
LAMP1-201ENST00000332556 CCDC173Q0VFZ6 552 aa23.18■■□□□ 1.3
LAMP1-201ENST00000332556 NPHP4O75161 1426 aaPredicted RBP23.18■■□□□ 1.3
LAMP1-201ENST00000332556 RRP9O43818 475 aaKnown RBP23.17■■□□□ 1.3
LAMP1-201ENST00000332556 KLHDC4Q8TBB5 520 aa23.17■■□□□ 1.3
LAMP1-201ENST00000332556 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
LAMP1-201ENST00000332556 C9orf78Q9NZ63 289 aaPredicted RBP23.17■■□□□ 1.3
LAMP1-201ENST00000332556 GIGYF1O75420 1035 aaPredicted RBP23.16■■□□□ 1.3
LAMP1-201ENST00000332556 ZDHHC9Q9Y397 364 aa23.16■■□□□ 1.3
LAMP1-201ENST00000332556 GLIPR1L2Q4G1C9 344 aa23.16■■□□□ 1.3
LAMP1-201ENST00000332556 KIAA1211Q6ZU35 1233 aa23.15■■□□□ 1.3
LAMP1-201ENST00000332556 ANP32BQ92688 251 aaKnown RBP23.15■■□□□ 1.3
LAMP1-201ENST00000332556 SIL1Q9H173 461 aa23.15■■□□□ 1.3
LAMP1-201ENST00000332556 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
LAMP1-201ENST00000332556 CPA1P15085 419 aa23.15■■□□□ 1.3
LAMP1-201ENST00000332556 CWC27Q6UX04 472 aaKnown RBP23.15■■□□□ 1.3
LAMP1-201ENST00000332556 TMX3Q96JJ7 454 aa23.15■■□□□ 1.3
LAMP1-201ENST00000332556 PPP1R9BQ96SB3 815 aa23.15■■□□□ 1.3
LAMP1-201ENST00000332556 RBM27Q9P2N5 1060 aaKnown RBP23.15■■□□□ 1.3
LAMP1-201ENST00000332556 NFATC2IPQ8NCF5 419 aa23.14■■□□□ 1.29
LAMP1-201ENST00000332556 PI4K2BQ8TCG2 481 aa23.14■■□□□ 1.29
LAMP1-201ENST00000332556 CSB-PGBD3P0DP91 1061 aa23.13■■□□□ 1.29
LAMP1-201ENST00000332556 POLA2Q14181 598 aa23.13■■□□□ 1.29
LAMP1-201ENST00000332556 ZSCAN23Q3MJ62 389 aa23.13■■□□□ 1.29
LAMP1-201ENST00000332556 CLEC17AQ6ZS10 378 aa23.13■■□□□ 1.29
LAMP1-201ENST00000332556 LMBRD1Q9NUN5 540 aa23.13■■□□□ 1.29
LAMP1-201ENST00000332556 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
LAMP1-201ENST00000332556 ZSCAN30Q86W11 494 aa23.13■■□□□ 1.29
LAMP1-201ENST00000332556 PRPF40AO75400 957 aaKnown RBP23.12■■□□□ 1.29
LAMP1-201ENST00000332556 RGPD5Q99666 1765 aa23.12■■□□□ 1.29
LAMP1-201ENST00000332556 BABAM1Q9NWV8 329 aa23.12■■□□□ 1.29
LAMP1-201ENST00000332556 RBSNQ9H1K0 784 aa23.11■■□□□ 1.29
LAMP1-201ENST00000332556 STAP2Q9UGK3 403 aa23.11■■□□□ 1.29
LAMP1-201ENST00000332556 MSNP26038 577 aaKnown RBP23.1■■□□□ 1.29
LAMP1-201ENST00000332556 AMOTQ4VCS5 1084 aa23.1■■□□□ 1.29
LAMP1-201ENST00000332556 SUCLG2Q96I99 432 aa23.1■■□□□ 1.29
LAMP1-201ENST00000332556 PRIM1P49642 420 aaKnown RBP23.09■■□□□ 1.29
LAMP1-201ENST00000332556 NUCB2P80303 420 aa23.09■■□□□ 1.29
LAMP1-201ENST00000332556 ERBB3P21860 1342 aa23.09■■□□□ 1.29
LAMP1-201ENST00000332556 KIF1BPQ96EK5 621 aa23.09■■□□□ 1.29
LAMP1-201ENST00000332556 NSFL1CQ9UNZ2 370 aaKnown RBP23.09■■□□□ 1.29
LAMP1-201ENST00000332556 CYP2E1P05181 493 aaPredicted RBP23.08■■□□□ 1.29
LAMP1-201ENST00000332556 HSPA2P54652 639 aa23.08■■□□□ 1.29
LAMP1-201ENST00000332556 CCDC8Q9H0W5 538 aaPredicted RBP23.08■■□□□ 1.29
LAMP1-201ENST00000332556 GPT2Q8TD30 523 aa23.07■■□□□ 1.28
LAMP1-201ENST00000332556 RAPGEF4Q8WZA2 1011 aa23.07■■□□□ 1.28
LAMP1-201ENST00000332556 BICC1Q9H694 974 aaKnown RBP23.07■■□□□ 1.28
LAMP1-201ENST00000332556 CCDC9Q9Y3X0 531 aaKnown RBP23.07■■□□□ 1.28
LAMP1-201ENST00000332556 ZNF445P59923 1031 aa23.07■■□□□ 1.28
LAMP1-201ENST00000332556 KSR2Q6VAB6 950 aa23.07■■□□□ 1.28
LAMP1-201ENST00000332556 RASEFQ8IZ41 740 aa23.07■■□□□ 1.28
LAMP1-201ENST00000332556 KAZALD1Q96I82 304 aa23.07■■□□□ 1.28
LAMP1-201ENST00000332556 TLR7Q9NYK1 1049 aaKnown RBP23.07■■□□□ 1.28
LAMP1-201ENST00000332556 ZMYND15Q9H091 742 aa23.06■■□□□ 1.28
LAMP1-201ENST00000332556 GDPD2Q9HCC8 539 aa23.06■■□□□ 1.28
LAMP1-201ENST00000332556 RIC3Q7Z5B4 369 aa23.06■■□□□ 1.28
LAMP1-201ENST00000332556 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
LAMP1-201ENST00000332556 PDIA6Q15084 440 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms