RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 CAMK4Q16566 473 aa19.33■□□□□ 0.69
NSMCE3-201ENST00000332303 ANKRD18BA2A2Z9 1011 aa19.33■□□□□ 0.68
NSMCE3-201ENST00000332303 DZIP1Q86YF9 867 aaKnown RBP19.33■□□□□ 0.68
NSMCE3-201ENST00000332303 EVI5LQ96CN4 794 aa19.33■□□□□ 0.68
NSMCE3-201ENST00000332303 IL16Q14005 1332 aa19.33■□□□□ 0.68
NSMCE3-201ENST00000332303 PCF11O94913 1555 aaKnown RBP19.33■□□□□ 0.68
NSMCE3-201ENST00000332303 UBXN4Q92575 508 aa19.33■□□□□ 0.68
NSMCE3-201ENST00000332303 PTPN23Q9H3S7 1636 aa19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 KIAA1328Q86T90 577 aa19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 CRACR2BQ8N4Y2 399 aaPredicted RBP19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 SEPT11Q9NVA2 429 aaKnown RBP19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 MPHOSPH10O00566 681 aaKnown RBP19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 TEX13AQ9BXU3 409 aaPredicted RBP19.32■□□□□ 0.68
NSMCE3-201ENST00000332303 CTAGE5O15320 804 aa19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 ZNF397Q8NF99 534 aaPredicted RBP19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 TAF4BQ92750 862 aa19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 TBC1D2Q9BYX2 928 aa19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 SLC12A7Q9Y666 1083 aa19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 DHX29Q7Z478 1369 aaKnown RBP19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 RANBP6O60518 1105 aaKnown RBP19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 IFNL2Q8IZJ0 200 aa19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
NSMCE3-201ENST00000332303 SEPT7Q16181 437 aaKnown RBP19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 UQCRHLA0A096LP55 91 aa19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 UQCRHP07919 91 aa19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 ZRSR2Q15696 482 aaKnown RBP19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 ZNF444Q8N0Y2 327 aaPredicted RBP19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 ANKRD18AQ8IVF6 992 aa19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 NOS1P29475 1434 aa19.3■□□□□ 0.68
NSMCE3-201ENST00000332303 FAM135AQ9P2D6 1515 aa19.29■□□□□ 0.68
NSMCE3-201ENST00000332303 IFIT3O14879 490 aaKnown RBP19.29■□□□□ 0.68
NSMCE3-201ENST00000332303 ZBTB3Q9H5J0 574 aa19.29■□□□□ 0.68
NSMCE3-201ENST00000332303 EXOC5O00471 708 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 SKAP1Q86WV1 359 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 CCDC82Q8N4S0 544 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 ZSCAN12O43309 604 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 TNIP1Q15025 636 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 KLHL10Q6JEL2 608 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 LDHAL6AQ6ZMR3 332 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 DDX19AQ9NUU7 478 aaKnown RBP19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 KIF14Q15058 1648 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 GOLGA8BA8MQT2 603 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 DESP17661 470 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
NSMCE3-201ENST00000332303 SSFA2P28290 1259 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 GUCY1B3Q02153 619 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 MAP3K2Q9Y2U5 619 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 GOLGA8AA7E2F4 631 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 KIAA0754O94854 1291 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 PTPN14Q15678 1187 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 TBC1D9Q6ZT07 1266 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 SLF2Q8IX21 1173 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 FKBP15Q5T1M5 1219 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
NSMCE3-201ENST00000332303 ANKRD36BQ8N2N9 1353 aa19.27■□□□□ 0.67
NSMCE3-201ENST00000332303 CCDC194A0A1B0GVG4 234 aa19.27■□□□□ 0.67
NSMCE3-201ENST00000332303 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.67
NSMCE3-201ENST00000332303 CENPHQ9H3R5 247 aa19.27■□□□□ 0.67
NSMCE3-201ENST00000332303 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 SPA17Q15506 151 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 KRT28Q7Z3Y7 464 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 TTF1Q15361 905 aaPredicted RBP19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 UBE3BQ7Z3V4 1068 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 CCDC148Q8NFR7 591 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 TNPO1Q92973 898 aaKnown RBP19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 GBP3Q9H0R5 595 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 CWC25Q9NXE8 425 aaPredicted RBP19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 GPTP24298 496 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 CETN2P41208 172 aa19.26■□□□□ 0.67
NSMCE3-201ENST00000332303 GOLGA6L7A0A1B0GV03 622 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 POTEJP0CG39 1038 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 CEBPAP49715 358 aaPredicted RBP19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 GOLIM4O00461 696 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 JAKMIP3Q5VZ66 844 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 CATIPQ7Z7H3 387 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 ACEP12821 1306 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 KIF20AO95235 890 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 LDHCP07864 332 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 TMEM266Q2M3C6 531 aa19.25■□□□□ 0.67
NSMCE3-201ENST00000332303 ADAMTS2O95450 1211 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 FGFR1OPO95684 399 aaKnown RBP19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 KIF18AQ8NI77 898 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 TSG101Q99816 390 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 HMG20BQ9P0W2 317 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 VPS36Q86VN1 386 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 TAX1BP1Q86VP1 789 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 CNNM3Q8NE01 707 aa19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
NSMCE3-201ENST00000332303 SNRPA1P09661 255 aaKnown RBP19.23■□□□□ 0.67
NSMCE3-201ENST00000332303 MATR3P43243 847 aaKnown RBP eCLIP19.23■□□□□ 0.67
NSMCE3-201ENST00000332303 FSIP1Q8NA03 581 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms