RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
TRAIP-201ENST00000331456 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
TRAIP-201ENST00000331456 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
TRAIP-201ENST00000331456 HDAC5Q9UQL6 1122 aa17.34■□□□□ 0.37
TRAIP-201ENST00000331456 MFAP1P55081 439 aaKnown RBP17.33■□□□□ 0.37
TRAIP-201ENST00000331456 PROSER3Q2NL68 480 aa17.33■□□□□ 0.37
TRAIP-201ENST00000331456 MAP3K2Q9Y2U5 619 aa17.33■□□□□ 0.37
TRAIP-201ENST00000331456 APBB1O00213 710 aa17.33■□□□□ 0.36
TRAIP-201ENST00000331456 LARP1Q6PKG0 1096 aaKnown RBP17.33■□□□□ 0.36
TRAIP-201ENST00000331456 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
TRAIP-201ENST00000331456 ERVV-2B6SEH9 535 aa17.32■□□□□ 0.36
TRAIP-201ENST00000331456 BECN1Q14457 450 aa17.32■□□□□ 0.36
TRAIP-201ENST00000331456 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
TRAIP-201ENST00000331456 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
TRAIP-201ENST00000331456 C22orf23Q9BZE7 217 aa17.31■□□□□ 0.36
TRAIP-201ENST00000331456 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
TRAIP-201ENST00000331456 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
TRAIP-201ENST00000331456 PDIA6Q15084 440 aa17.31■□□□□ 0.36
TRAIP-201ENST00000331456 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
TRAIP-201ENST00000331456 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
TRAIP-201ENST00000331456 C5P01031 1676 aa17.31■□□□□ 0.36
TRAIP-201ENST00000331456 CDC45O75419 566 aa17.3■□□□□ 0.36
TRAIP-201ENST00000331456 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-201ENST00000331456 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
TRAIP-201ENST00000331456 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
TRAIP-201ENST00000331456 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
TRAIP-201ENST00000331456 EXOC6BQ9Y2D4 811 aa17.3■□□□□ 0.36
TRAIP-201ENST00000331456 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
TRAIP-201ENST00000331456 CERKQ8TCT0 537 aa17.29■□□□□ 0.36
TRAIP-201ENST00000331456 BTG4Q9NY30 223 aa17.29■□□□□ 0.36
TRAIP-201ENST00000331456 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
TRAIP-201ENST00000331456 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
TRAIP-201ENST00000331456 COL14A1Q05707 1796 aaKnown RBP17.29■□□□□ 0.36
TRAIP-201ENST00000331456 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
TRAIP-201ENST00000331456 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
TRAIP-201ENST00000331456 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
TRAIP-201ENST00000331456 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
TRAIP-201ENST00000331456 MYL6BP14649 208 aa17.28■□□□□ 0.36
TRAIP-201ENST00000331456 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
TRAIP-201ENST00000331456 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
TRAIP-201ENST00000331456 LTBP4Q8N2S1 1624 aa17.28■□□□□ 0.36
TRAIP-201ENST00000331456 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
TRAIP-201ENST00000331456 RAB11FIP3O75154 756 aa17.27■□□□□ 0.36
TRAIP-201ENST00000331456 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
TRAIP-201ENST00000331456 POLA2Q14181 598 aa17.27■□□□□ 0.36
TRAIP-201ENST00000331456 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
TRAIP-201ENST00000331456 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
TRAIP-201ENST00000331456 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
TRAIP-201ENST00000331456 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
TRAIP-201ENST00000331456 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
TRAIP-201ENST00000331456 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
TRAIP-201ENST00000331456 XAGE3Q8WTP9 111 aa17.26■□□□□ 0.35
TRAIP-201ENST00000331456 ERBB4Q15303 1308 aa17.26■□□□□ 0.35
TRAIP-201ENST00000331456 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
TRAIP-201ENST00000331456 CASC1Q6TDU7 716 aa17.25■□□□□ 0.35
TRAIP-201ENST00000331456 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
TRAIP-201ENST00000331456 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
TRAIP-201ENST00000331456 LAMB4A4D0S4 1761 aa17.25■□□□□ 0.35
TRAIP-201ENST00000331456 SHANK3Q9BYB0 1731 aa17.24■□□□□ 0.35
TRAIP-201ENST00000331456 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
TRAIP-201ENST00000331456 PDE1AP54750 535 aa17.24■□□□□ 0.35
TRAIP-201ENST00000331456 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
TRAIP-201ENST00000331456 GRM8O00222 908 aa17.23■□□□□ 0.35
TRAIP-201ENST00000331456 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
TRAIP-201ENST00000331456 MTX1Q13505 466 aa17.23■□□□□ 0.35
TRAIP-201ENST00000331456 ANKRD13DQ6ZTN6 518 aa17.23■□□□□ 0.35
TRAIP-201ENST00000331456 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
TRAIP-201ENST00000331456 UTYO14607 1347 aa17.22■□□□□ 0.35
TRAIP-201ENST00000331456 SDSP20132 328 aa17.22■□□□□ 0.35
TRAIP-201ENST00000331456 MX1P20591 662 aa17.22■□□□□ 0.35
TRAIP-201ENST00000331456 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 UBR2Q8IWV8 1755 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 GLI3P10071 1580 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 MYD88Q99836 296 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
TRAIP-201ENST00000331456 NEURL1BA8MQ27 555 aa17.2■□□□□ 0.34
TRAIP-201ENST00000331456 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
TRAIP-201ENST00000331456 AOX1Q06278 1338 aa17.2■□□□□ 0.34
TRAIP-201ENST00000331456 COL16A1Q07092 1604 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-201ENST00000331456 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
TRAIP-201ENST00000331456 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
TRAIP-201ENST00000331456 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
TRAIP-201ENST00000331456 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
TRAIP-201ENST00000331456 OS9Q13438 667 aaPredicted RBP17.19■□□□□ 0.34
TRAIP-201ENST00000331456 DISP2A7MBM2 1401 aa17.19■□□□□ 0.34
TRAIP-201ENST00000331456 TNS2Q63HR2 1409 aa17.19■□□□□ 0.34
TRAIP-201ENST00000331456 MYT1Q01538 1121 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 GCKRQ14397 625 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 TOM1O60784 492 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 PTCD1O75127 700 aaKnown RBP17.18■□□□□ 0.34
TRAIP-201ENST00000331456 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-201ENST00000331456 NBR1Q14596 966 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
TRAIP-201ENST00000331456 PLCH1Q4KWH8 1693 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms