RNA–Protein interactions for RNA: ENST00000330953.5

CCR4-201, Transcript of C-C motif chemokine receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR4, Length 3,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR4-201ENST00000330953 TRIM28Q13263 835 aaKnown RBP11.37□□□□□ -0.59
CCR4-201ENST00000330953 CCDC30Q5VVM6 783 aa11.37□□□□□ -0.59
CCR4-201ENST00000330953 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
CCR4-201ENST00000330953 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
CCR4-201ENST00000330953 SLC27A3Q5K4L6 730 aa11.36□□□□□ -0.59
CCR4-201ENST00000330953 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
CCR4-201ENST00000330953 SNRPA1P09661 255 aaKnown RBP11.36□□□□□ -0.59
CCR4-201ENST00000330953 EXOSC9Q06265 439 aaKnown RBP11.36□□□□□ -0.59
CCR4-201ENST00000330953 NGLY1Q96IV0 654 aa11.36□□□□□ -0.59
CCR4-201ENST00000330953 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
CCR4-201ENST00000330953 HYPKQ9NX55 129 aa11.36□□□□□ -0.59
CCR4-201ENST00000330953 MCM10Q7L590 875 aa11.35□□□□□ -0.59
CCR4-201ENST00000330953 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
CCR4-201ENST00000330953 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCR4-201ENST00000330953 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
CCR4-201ENST00000330953 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
CCR4-201ENST00000330953 IPO8O15397 1037 aaKnown RBP11.35□□□□□ -0.59
CCR4-201ENST00000330953 DUOX1Q9NRD9 1551 aa11.35□□□□□ -0.59
CCR4-201ENST00000330953 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
CCR4-201ENST00000330953 API5Q9BZZ5 524 aaKnown RBP11.34□□□□□ -0.59
CCR4-201ENST00000330953 RTL9Q8NET4 1388 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 CSB-PGBD3P0DP91 1061 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 FAM196AQ6ZSG2 479 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 CCDC125Q86Z20 511 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 TSPYL4Q9UJ04 414 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 ADCY9O60503 1353 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
CCR4-201ENST00000330953 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 PIGBQ92521 554 aa11.34□□□□□ -0.59
CCR4-201ENST00000330953 SSH1Q8WYL5 1049 aa11.33□□□□□ -0.6
CCR4-201ENST00000330953 AK7Q96M32 723 aa11.33□□□□□ -0.6
CCR4-201ENST00000330953 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CCR4-201ENST00000330953 DBF4Q9UBU7 674 aaPredicted RBP11.33□□□□□ -0.6
CCR4-201ENST00000330953 TEFQ10587 303 aa11.32□□□□□ -0.6
CCR4-201ENST00000330953 ATF7IPQ6VMQ6 1270 aa11.32□□□□□ -0.6
CCR4-201ENST00000330953 ALDH1L1O75891 902 aa11.32□□□□□ -0.6
CCR4-201ENST00000330953 MTX1Q13505 466 aa11.32□□□□□ -0.6
CCR4-201ENST00000330953 ARID3AQ99856 593 aa11.32□□□□□ -0.6
CCR4-201ENST00000330953 RRP7AQ9Y3A4 280 aaKnown RBP11.32□□□□□ -0.6
CCR4-201ENST00000330953 KDM2BQ8NHM5 1336 aa11.32□□□□□ -0.6
CCR4-201ENST00000330953 ANKRD31Q8N7Z5 1873 aa11.31□□□□□ -0.6
CCR4-201ENST00000330953 CABP4P57796 275 aa11.31□□□□□ -0.6
CCR4-201ENST00000330953 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
CCR4-201ENST00000330953 ZKSCAN2Q63HK3 967 aa11.31□□□□□ -0.6
CCR4-201ENST00000330953 PLA2G12BQ9BX93 195 aa11.31□□□□□ -0.6
CCR4-201ENST00000330953 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
CCR4-201ENST00000330953 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
CCR4-201ENST00000330953 C8orf37Q96NL8 207 aa11.31□□□□□ -0.6
CCR4-201ENST00000330953 QTRT2Q9H974 415 aaKnown RBP11.31□□□□□ -0.6
CCR4-201ENST00000330953 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
CCR4-201ENST00000330953 TSPYL6Q8N831 410 aa11.3□□□□□ -0.6
CCR4-201ENST00000330953 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
CCR4-201ENST00000330953 TMOD3Q9NYL9 352 aa11.3□□□□□ -0.6
CCR4-201ENST00000330953 CCT4P50991 539 aaKnown RBP11.3□□□□□ -0.6
CCR4-201ENST00000330953 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
CCR4-201ENST00000330953 TICAM2Q86XR7 235 aa11.3□□□□□ -0.6
CCR4-201ENST00000330953 PSME4Q14997 1843 aa11.3□□□□□ -0.6
CCR4-201ENST00000330953 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
CCR4-201ENST00000330953 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
CCR4-201ENST00000330953 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
CCR4-201ENST00000330953 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
CCR4-201ENST00000330953 NFATC2IPQ8NCF5 419 aa11.29□□□□□ -0.6
CCR4-201ENST00000330953 TSR2Q969E8 191 aaKnown RBP11.29□□□□□ -0.6
CCR4-201ENST00000330953 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
CCR4-201ENST00000330953 DOCK2Q92608 1830 aa11.28□□□□□ -0.6
CCR4-201ENST00000330953 STRN4Q9NRL3 753 aa11.28□□□□□ -0.6
CCR4-201ENST00000330953 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
CCR4-201ENST00000330953 ADAMTS2O95450 1211 aa11.28□□□□□ -0.6
CCR4-201ENST00000330953 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
CCR4-201ENST00000330953 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
CCR4-201ENST00000330953 ZBTB40Q9NUA8 1239 aa11.28□□□□□ -0.6
CCR4-201ENST00000330953 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.6
CCR4-201ENST00000330953 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.6
CCR4-201ENST00000330953 A0A087WZG4 1122 aa11.27□□□□□ -0.61
CCR4-201ENST00000330953 TRIM27P14373 513 aa11.27□□□□□ -0.61
CCR4-201ENST00000330953 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
CCR4-201ENST00000330953 DDX19BQ9UMR2 479 aa11.27□□□□□ -0.61
CCR4-201ENST00000330953 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
CCR4-201ENST00000330953 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
CCR4-201ENST00000330953 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
CCR4-201ENST00000330953 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
CCR4-201ENST00000330953 ISCA1Q9BUE6 129 aa11.27□□□□□ -0.61
CCR4-201ENST00000330953 SOX12O15370 315 aa11.26□□□□□ -0.61
CCR4-201ENST00000330953 CASP7P55210 303 aa11.26□□□□□ -0.61
CCR4-201ENST00000330953 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
CCR4-201ENST00000330953 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
CCR4-201ENST00000330953 RXRBP28702 533 aa11.26□□□□□ -0.61
CCR4-201ENST00000330953 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
CCR4-201ENST00000330953 DEKP35659 375 aaKnown RBP11.25□□□□□ -0.61
CCR4-201ENST00000330953 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
CCR4-201ENST00000330953 DZIP1LQ8IYY4 767 aaKnown RBP11.25□□□□□ -0.61
CCR4-201ENST00000330953 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
CCR4-201ENST00000330953 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
CCR4-201ENST00000330953 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
CCR4-201ENST00000330953 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
CCR4-201ENST00000330953 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
CCR4-201ENST00000330953 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
CCR4-201ENST00000330953 COL11A2P13942 1736 aaPredicted RBP11.24□□□□□ -0.61
CCR4-201ENST00000330953 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
CCR4-201ENST00000330953 FLIIQ13045 1269 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms