RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.21
DNMT3B-202ENST00000328111 PREX2Q70Z35 1606 aa16.33■□□□□ 0.2
DNMT3B-202ENST00000328111 CAMK4Q16566 473 aa16.33■□□□□ 0.2
DNMT3B-202ENST00000328111 ZGPATQ8N5A5 531 aaKnown RBP16.33■□□□□ 0.2
DNMT3B-202ENST00000328111 EVI5LQ96CN4 794 aa16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 HOOK1Q9UJC3 728 aaKnown RBP16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 TPM3P06753 285 aa16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■□□□ 13.8
DNMT3B-202ENST00000328111 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 TRPM2O94759 1503 aa16.32■□□□□ 0.2
DNMT3B-202ENST00000328111 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 MSH6P52701 1360 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 PRDM15P57071 1507 aaPredicted RBP16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 YEATS2Q9ULM3 1422 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 SART3Q15020 963 aaKnown RBP16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 STX6O43752 255 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 RAB3GAP1Q15042 981 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
DNMT3B-202ENST00000328111 HOXC9P31274 260 aa16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 MPHOSPH8Q99549 860 aa16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
DNMT3B-202ENST00000328111 ERCC6L2Q5T890 1561 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 SMC2O95347 1197 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 TPM2P07951 284 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 TBX22Q9Y458 520 aa16.29■□□□□ 0.2
DNMT3B-202ENST00000328111 TPM1P09493 284 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 GJB2P29033 226 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 AKAP4Q5JQC9 854 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 CCDC183Q5T5S1 534 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 NECAB1Q8N987 351 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 GRM8O00222 908 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 RAD21O60216 631 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 METTL24Q5JXM2 366 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 KSR2Q6VAB6 950 aa16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
DNMT3B-202ENST00000328111 GUCY1B3Q02153 619 aa16.27■□□□□ 0.2
DNMT3B-202ENST00000328111 TSR1Q2NL82 804 aaKnown RBP16.27■□□□□ 0.2
DNMT3B-202ENST00000328111 SNRKQ9NRH2 765 aa16.27■□□□□ 0.2
DNMT3B-202ENST00000328111 GCP02774 474 aa16.27■□□□□ 0.19
DNMT3B-202ENST00000328111 CHMLP26374 656 aa16.27■□□□□ 0.19
DNMT3B-202ENST00000328111 OLFM4Q6UX06 510 aa16.27■□□□□ 0.19
DNMT3B-202ENST00000328111 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 GOLIM4O00461 696 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 ANAPC15P60006 121 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 SCAND2PQ9GZW5 306 aaPredicted RBP16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 SYNMO15061 1565 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 STARD3NLO95772 234 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 VPS53Q5VIR6 699 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 CKAP2LQ8IYA6 745 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 SOS1Q07889 1333 aaPredicted RBP16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
DNMT3B-202ENST00000328111 CLSTN1O94985 981 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 PDILTQ8N807 584 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 MYOM2P54296 1465 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 XBP1P17861 261 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 CCT2P78371 535 aaKnown RBP16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 PNMA6EA0A0J9YXQ4 647 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
DNMT3B-202ENST00000328111 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 LTKP29376 864 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 GPTP24298 496 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
DNMT3B-202ENST00000328111 NACAP1Q9BZK3 213 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms