RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 THRAP3Q9Y2W1 955 aaKnown RBP15.3■□□□□ 0.04
CCDC149-201ENST00000324309 CDKL5O76039 1030 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
CCDC149-201ENST00000324309 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
CCDC149-201ENST00000324309 ADGRL3Q9HAR2 1447 aa15.29■□□□□ 0.04
CCDC149-201ENST00000324309 MTHFSDQ2M296 383 aaKnown RBP15.28■□□□□ 0.04
CCDC149-201ENST00000324309 TMEM57Q8N5G2 664 aa15.28■□□□□ 0.04
CCDC149-201ENST00000324309 SIL1Q9H173 461 aa15.28■□□□□ 0.04
CCDC149-201ENST00000324309 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
CCDC149-201ENST00000324309 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
CCDC149-201ENST00000324309 THUMPD2Q9BTF0 503 aaKnown RBP15.28■□□□□ 0.04
CCDC149-201ENST00000324309 TRAPPC3LQ5T215 181 aa15.28■□□□□ 0.04
CCDC149-201ENST00000324309 EYA3Q99504 573 aa15.28■□□□□ 0.04
CCDC149-201ENST00000324309 DRC7Q8IY82 874 aa15.27■□□□□ 0.04
CCDC149-201ENST00000324309 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.04
CCDC149-201ENST00000324309 C22orf23Q9BZE7 217 aa15.27■□□□□ 0.04
CCDC149-201ENST00000324309 HDAC9Q9UKV0 1011 aa15.27■□□□□ 0.04
CCDC149-201ENST00000324309 ANKRD18AQ8IVF6 992 aa15.27■□□□□ 0.03
CCDC149-201ENST00000324309 AIDAQ96BJ3 306 aa15.27■□□□□ 0.03
CCDC149-201ENST00000324309 IL13P35225 146 aa15.27■□□□□ 0.03
CCDC149-201ENST00000324309 TRIM22Q8IYM9 498 aa15.27■□□□□ 0.03
CCDC149-201ENST00000324309 CDC42BPGQ6DT37 1551 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 NOL8Q76FK4 1167 aaKnown RBP15.26■□□□□ 0.03
CCDC149-201ENST00000324309 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
CCDC149-201ENST00000324309 WASF1Q92558 559 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 DZIP3Q86Y13 1208 aaKnown RBP15.26■□□□□ 0.03
CCDC149-201ENST00000324309 RNF41Q9H4P4 317 aaPredicted RBP15.26■□□□□ 0.03
CCDC149-201ENST00000324309 MCTP1Q6DN14 999 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 CARD14Q9BXL6 1004 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
CCDC149-201ENST00000324309 BAG3O95817 575 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 ANKRD20A12PQ8NF67 263 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 ZSCAN31Q96LW9 406 aaPredicted RBP15.25■□□□□ 0.03
CCDC149-201ENST00000324309 USP6P35125 1406 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 MYO1BO43795 1136 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 TDO2P48775 406 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 IMMTQ16891 758 aaKnown RBP15.25■□□□□ 0.03
CCDC149-201ENST00000324309 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 CARD10Q9BWT7 1032 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCDC149-201ENST00000324309 CYP46A1Q9Y6A2 500 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 LINS1Q8NG48 757 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 ACSBG1Q96GR2 724 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
CCDC149-201ENST00000324309 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
CCDC149-201ENST00000324309 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
CCDC149-201ENST00000324309 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
CCDC149-201ENST00000324309 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
CCDC149-201ENST00000324309 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
CCDC149-201ENST00000324309 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
CCDC149-201ENST00000324309 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
CCDC149-201ENST00000324309 CLTCQ00610 1675 aaKnown RBP15.24■□□□□ 0.03
CCDC149-201ENST00000324309 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
CCDC149-201ENST00000324309 TPD52L1Q16890 204 aaPredicted RBP15.23■□□□□ 0.03
CCDC149-201ENST00000324309 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
CCDC149-201ENST00000324309 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
CCDC149-201ENST00000324309 MX1P20591 662 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 UBAC1Q9BSL1 405 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 CLTCL1P53675 1640 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 XAGE3Q8WTP9 111 aa15.23■□□□□ 0.03
CCDC149-201ENST00000324309 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC149-201ENST00000324309 LDHAL6AQ6ZMR3 332 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 ZNF804AQ7Z570 1209 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 SOGA3Q5TF21 947 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
CCDC149-201ENST00000324309 IL15P40933 162 aaPredicted RBP15.22■□□□□ 0.03
CCDC149-201ENST00000324309 TRAF1Q13077 416 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCDC149-201ENST00000324309 DIP2AQ14689 1571 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 SUPT20HQ8NEM7 779 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCDC149-201ENST00000324309 CHMP5Q9NZZ3 219 aa15.22■□□□□ 0.03
CCDC149-201ENST00000324309 TPM1P09493 284 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 USP5P45974 858 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 SLKQ9H2G2 1235 aaPredicted RBP15.21■□□□□ 0.03
CCDC149-201ENST00000324309 DNTTIP2Q5QJE6 756 aaKnown RBP15.21■□□□□ 0.03
CCDC149-201ENST00000324309 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 DLC1Q96QB1 1528 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 TPM3P06753 285 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
CCDC149-201ENST00000324309 ZNF396Q96N95 335 aaPredicted RBP15.21■□□□□ 0.02
CCDC149-201ENST00000324309 CFAP65Q6ZU64 1925 aaKnown RBP15.21■□□□□ 0.02
CCDC149-201ENST00000324309 TXLNAP40222 546 aa15.2■□□□□ 0.02
CCDC149-201ENST00000324309 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
CCDC149-201ENST00000324309 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
CCDC149-201ENST00000324309 GPTP24298 496 aa15.2■□□□□ 0.02
CCDC149-201ENST00000324309 CHPF2Q9P2E5 772 aa15.2■□□□□ 0.02
CCDC149-201ENST00000324309 ALKQ9UM73 1620 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms