RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PCDH11YQ9BZA8 1340 aa21.13■□□□□ 0.97
SSR4-201ENST00000320857 NGLY1Q96IV0 654 aa21.13■□□□□ 0.97
SSR4-201ENST00000320857 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
SSR4-201ENST00000320857 HYPKQ9NX55 129 aa21.13■□□□□ 0.97
SSR4-201ENST00000320857 UBTFL1P0CB47 393 aaPredicted RBP21.12■□□□□ 0.97
SSR4-201ENST00000320857 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
SSR4-201ENST00000320857 ATP8B2P98198 1209 aa21.12■□□□□ 0.97
SSR4-201ENST00000320857 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
SSR4-201ENST00000320857 BTG4Q9NY30 223 aa21.12■□□□□ 0.97
SSR4-201ENST00000320857 PI4KAP2A4QPH2 592 aa21.11■□□□□ 0.97
SSR4-201ENST00000320857 PI4KAP1Q8N8J0 262 aa21.11■□□□□ 0.97
SSR4-201ENST00000320857 BEND3Q5T5X7 828 aa21.1■□□□□ 0.97
SSR4-201ENST00000320857 PLEKHM2Q8IWE5 1019 aa21.1■□□□□ 0.97
SSR4-201ENST00000320857 CABP4P57796 275 aa21.09■□□□□ 0.97
SSR4-201ENST00000320857 SLC39A6Q13433 755 aa21.09■□□□□ 0.97
SSR4-201ENST00000320857 NKX1-1Q15270 411 aaPredicted RBP21.09■□□□□ 0.97
SSR4-201ENST00000320857 TTC5Q8N0Z6 440 aa21.09■□□□□ 0.97
SSR4-201ENST00000320857 DDX21Q9NR30 783 aaKnown RBP eCLIP21.09■□□□□ 0.97
SSR4-201ENST00000320857 LRRFIP2Q9Y608 721 aaKnown RBP21.09■□□□□ 0.97
SSR4-201ENST00000320857 ANXA1P04083 346 aa21.09■□□□□ 0.97
SSR4-201ENST00000320857 ADCY9O60503 1353 aa21.08■□□□□ 0.97
SSR4-201ENST00000320857 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
SSR4-201ENST00000320857 EIF5BO60841 1220 aaKnown RBP21.08■□□□□ 0.96
SSR4-201ENST00000320857 DDX58O95786 925 aaKnown RBP21.08■□□□□ 0.96
SSR4-201ENST00000320857 MFAP1P55081 439 aaKnown RBP21.08■□□□□ 0.96
SSR4-201ENST00000320857 KSR2Q6VAB6 950 aa21.08■□□□□ 0.96
SSR4-201ENST00000320857 PRAMEF22A3QJZ6 481 aa21.07■□□□□ 0.96
SSR4-201ENST00000320857 ALDH1L1O75891 902 aa21.07■□□□□ 0.96
SSR4-201ENST00000320857 BECN1Q14457 450 aa21.07■□□□□ 0.96
SSR4-201ENST00000320857 PROSER3Q2NL68 480 aa21.06■□□□□ 0.96
SSR4-201ENST00000320857 C22orf23Q9BZE7 217 aa21.06■□□□□ 0.96
SSR4-201ENST00000320857 AFF2P51816 1311 aa21.06■□□□□ 0.96
SSR4-201ENST00000320857 ERVV-2B6SEH9 535 aa21.05■□□□□ 0.96
SSR4-201ENST00000320857 SNRPA1P09661 255 aaKnown RBP21.05■□□□□ 0.96
SSR4-201ENST00000320857 TTC22Q5TAA0 569 aa21.05■□□□□ 0.96
SSR4-201ENST00000320857 FMNL2Q96PY5 1086 aa21.05■□□□□ 0.96
SSR4-201ENST00000320857 HDAC5Q9UQL6 1122 aa21.05■□□□□ 0.96
SSR4-201ENST00000320857 MAP3K2Q9Y2U5 619 aa21.05■□□□□ 0.96
SSR4-201ENST00000320857 APBB1O00213 710 aa21.05■□□□□ 0.96
SSR4-201ENST00000320857 C16orf71Q8IYS4 520 aaPredicted RBP21.05■□□□□ 0.96
SSR4-201ENST00000320857 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
SSR4-201ENST00000320857 PLCH1Q4KWH8 1693 aa21.04■□□□□ 0.96
SSR4-201ENST00000320857 PNMA6EA0A0J9YXQ4 647 aa21.04■□□□□ 0.96
SSR4-201ENST00000320857 SMARCA5O60264 1052 aaPredicted RBP21.04■□□□□ 0.96
SSR4-201ENST00000320857 CDC45O75419 566 aa21.04■□□□□ 0.96
SSR4-201ENST00000320857 C5P01031 1676 aa21.03■□□□□ 0.96
SSR4-201ENST00000320857 PDIA6Q15084 440 aa21.03■□□□□ 0.96
SSR4-201ENST00000320857 SSH3Q8TE77 659 aa21.03■□□□□ 0.96
SSR4-201ENST00000320857 LRRCC1Q9C099 1032 aa21.03■□□□□ 0.96
SSR4-201ENST00000320857 USP21Q9UK80 565 aa21.03■□□□□ 0.96
SSR4-201ENST00000320857 EXOC6BQ9Y2D4 811 aa21.02■□□□□ 0.96
SSR4-201ENST00000320857 IBTKQ9P2D0 1353 aaPredicted RBP21.02■□□□□ 0.96
SSR4-201ENST00000320857 DISP2A7MBM2 1401 aa21.02■□□□□ 0.96
SSR4-201ENST00000320857 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.95
SSR4-201ENST00000320857 USP35Q9P2H5 1018 aa21.02■□□□□ 0.95
SSR4-201ENST00000320857 SLC4A3P48751 1232 aa21.01■□□□□ 0.95
SSR4-201ENST00000320857 TBC1D9Q6ZT07 1266 aa21.01■□□□□ 0.95
SSR4-201ENST00000320857 DDX54Q8TDD1 881 aaKnown RBP21.01■□□□□ 0.95
SSR4-201ENST00000320857 RAB11FIP3O75154 756 aa21■□□□□ 0.95
SSR4-201ENST00000320857 NBPF7P0C2Y1 421 aaPredicted RBP21■□□□□ 0.95
SSR4-201ENST00000320857 POLA2Q14181 598 aa21■□□□□ 0.95
SSR4-201ENST00000320857 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
SSR4-201ENST00000320857 LINS1Q8NG48 757 aa21■□□□□ 0.95
SSR4-201ENST00000320857 OTUD7AQ8TE49 926 aaPredicted RBP21■□□□□ 0.95
SSR4-201ENST00000320857 BCL11AQ9H165 835 aa21■□□□□ 0.95
SSR4-201ENST00000320857 OSBPL3Q9H4L5 887 aa21■□□□□ 0.95
SSR4-201ENST00000320857 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
SSR4-201ENST00000320857 SLIT2O94813 1529 aa21■□□□□ 0.95
SSR4-201ENST00000320857 PPP1R42Q7Z4L9 355 aa20.99■□□□□ 0.95
SSR4-201ENST00000320857 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
SSR4-201ENST00000320857 AIMP1Q12904 312 aaKnown RBP20.99■□□□□ 0.95
SSR4-201ENST00000320857 UNC5CLQ8IV45 518 aa20.99■□□□□ 0.95
SSR4-201ENST00000320857 MYT1Q01538 1121 aa20.98■□□□□ 0.95
SSR4-201ENST00000320857 RIC3Q7Z5B4 369 aa20.98■□□□□ 0.95
SSR4-201ENST00000320857 GLI3P10071 1580 aa20.98■□□□□ 0.95
SSR4-201ENST00000320857 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
SSR4-201ENST00000320857 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
SSR4-201ENST00000320857 UBR2Q8IWV8 1755 aa20.97■□□□□ 0.95
SSR4-201ENST00000320857 RBM25P49756 843 aaKnown RBP20.97■□□□□ 0.95
SSR4-201ENST00000320857 BCL9LQ86UU0 1499 aa20.97■□□□□ 0.95
SSR4-201ENST00000320857 LAMB4A4D0S4 1761 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 MYL6BP14649 208 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 PDE1AP54750 535 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 HSP90AB4PQ58FF6 505 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 CASC1Q6TDU7 716 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 XAGE3Q8WTP9 111 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 WNK3Q9BYP7 1800 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 USP16Q9Y5T5 823 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 NWD2Q9ULI1 1742 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 TOGARAM1Q9Y4F4 1720 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 MTX1Q13505 466 aa20.96■□□□□ 0.95
SSR4-201ENST00000320857 SURF6O75683 361 aaKnown RBP20.95■□□□□ 0.94
SSR4-201ENST00000320857 COPS6Q7L5N1 327 aa20.95■□□□□ 0.94
SSR4-201ENST00000320857 UTYO14607 1347 aa20.94■□□□□ 0.94
SSR4-201ENST00000320857 GRM8O00222 908 aa20.94■□□□□ 0.94
SSR4-201ENST00000320857 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
SSR4-201ENST00000320857 QTRT2Q9H974 415 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms