RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 PPP1R42Q7Z4L9 355 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 DNAAF4Q8WXU2 420 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 ZNF142P52746 1687 aaPredicted RBP11.71□□□□□ -0.53
LSMEM1-201ENST00000312849 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
LSMEM1-201ENST00000312849 SETD1BQ9UPS6 1966 aaKnown RBP11.71□□□□□ -0.53
LSMEM1-201ENST00000312849 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
LSMEM1-201ENST00000312849 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
LSMEM1-201ENST00000312849 CAVIN1Q6NZI2 390 aaKnown RBP11.71□□□□□ -0.53
LSMEM1-201ENST00000312849 RGPD2P0DJD1 1756 aa11.71□□□□□ -0.54
LSMEM1-201ENST00000312849 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 HSPA4P34932 840 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 TEFQ10587 303 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 PKP1Q13835 747 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 TSHZ3Q63HK5 1081 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 CNTROBQ8N137 903 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 PHAXQ9H814 394 aaKnown RBP11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 MTX1Q13505 466 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 ANKLE2Q86XL3 938 aa11.7□□□□□ -0.54
LSMEM1-201ENST00000312849 SRGAP3O43295 1099 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 PSME1Q06323 249 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 PI4K2BQ8TCG2 481 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 DBF4Q9UBU7 674 aaPredicted RBP11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 PALD1Q9ULE6 856 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 CAMTA1Q9Y6Y1 1673 aa11.69□□□□□ -0.54
LSMEM1-201ENST00000312849 SIPA1L3O60292 1781 aaPredicted RBP11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 SLIT3O75094 1523 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 BTBD11A6QL63 1104 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 SGSM2O43147 1006 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 KIAA1211Q6ZU35 1233 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 RUFY2Q8WXA3 655 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 IL1RAPL2Q9NP60 686 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 RAD50Q92878 1312 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 WDR33Q9C0J8 1336 aaKnown RBP11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 GLRX3O76003 335 aaKnown RBP11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 C1orf141Q5JVX7 400 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 LRSAM1Q6UWE0 723 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 UNC5CLQ8IV45 518 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 GPT2Q8TD30 523 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 LGR6Q9HBX8 967 aa11.68□□□□□ -0.54
LSMEM1-201ENST00000312849 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
LSMEM1-201ENST00000312849 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
LSMEM1-201ENST00000312849 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
LSMEM1-201ENST00000312849 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
LSMEM1-201ENST00000312849 ADCY9O60503 1353 aa11.67□□□□□ -0.54
LSMEM1-201ENST00000312849 RNMTO43148 476 aaKnown RBP11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 ADAMTS7Q9UKP4 1686 aa11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 PHF14O94880 888 aa11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 NBPF7P0C2Y1 421 aaPredicted RBP11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 NAP1L5Q96NT1 182 aaPredicted RBP11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
LSMEM1-201ENST00000312849 ERBB4Q15303 1308 aa11.65□□□□□ -0.54
LSMEM1-201ENST00000312849 HEG1Q9ULI3 1381 aa11.65□□□□□ -0.54
LSMEM1-201ENST00000312849 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
LSMEM1-201ENST00000312849 PDLIM2Q96JY6 352 aa11.65□□□□□ -0.54
LSMEM1-201ENST00000312849 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
LSMEM1-201ENST00000312849 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.65□□□□□ -0.54
LSMEM1-201ENST00000312849 HIP1O00291 1037 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 ESCO1Q5FWF5 840 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 ARHGEF25Q86VW2 580 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 TTC14Q96N46 770 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 TMEM63CQ9P1W3 806 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 LIMCH1Q9UPQ0 1083 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 KIF1AQ12756 1690 aa11.64□□□□□ -0.55
LSMEM1-201ENST00000312849 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 UPF3BQ9BZI7 483 aaKnown RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 TM6SF1Q9BZW5 370 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 DIAPH3Q9NSV4 1193 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 C9orf78Q9NZ63 289 aaPredicted RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 TCHHQ07283 1943 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 KCNQ3O43525 872 aa11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
LSMEM1-201ENST00000312849 MCM5P33992 734 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms