RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CHL1O00533 1208 aa22.98■■□□□ 1.27
HERPUD2-201ENST00000311350 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.98■■□□□ 1.27
HERPUD2-201ENST00000311350 ZNF710Q8N1W2 664 aa22.97■■□□□ 1.27
HERPUD2-201ENST00000311350 ZNF830Q96NB3 372 aaPredicted RBP22.97■■□□□ 1.27
HERPUD2-201ENST00000311350 USP26Q9BXU7 913 aa22.97■■□□□ 1.27
HERPUD2-201ENST00000311350 PTMAP06454 111 aaKnown RBP22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 RXRBP28702 533 aa22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 CBX1P83916 185 aa22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 C16orf71Q8IYS4 520 aaPredicted RBP22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 FNBP4Q8N3X1 1017 aaPredicted RBP22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 DNTTIP2Q5QJE6 756 aaKnown RBP22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 CWC22Q9HCG8 908 aaKnown RBP22.96■■□□□ 1.27
HERPUD2-201ENST00000311350 CEP85Q6P2H3 762 aa22.95■■□□□ 1.26
HERPUD2-201ENST00000311350 CASC1Q6TDU7 716 aa22.95■■□□□ 1.26
HERPUD2-201ENST00000311350 ZRANB1Q9UGI0 708 aa22.95■■□□□ 1.26
HERPUD2-201ENST00000311350 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
HERPUD2-201ENST00000311350 USP21Q9UK80 565 aa22.94■■□□□ 1.26
HERPUD2-201ENST00000311350 C17orf53Q8N3J3 647 aaPredicted RBP22.94■■□□□ 1.26
HERPUD2-201ENST00000311350 RTL1A6NKG5 1358 aa22.94■■□□□ 1.26
HERPUD2-201ENST00000311350 FAM83GA6ND36 823 aa22.93■■□□□ 1.26
HERPUD2-201ENST00000311350 MYRIPQ8NFW9 859 aa22.93■■□□□ 1.26
HERPUD2-201ENST00000311350 CABLES1Q8TDN4 633 aa22.93■■□□□ 1.26
HERPUD2-201ENST00000311350 TRPM3Q9HCF6 1732 aaPredicted RBP22.93■■□□□ 1.26
HERPUD2-201ENST00000311350 PLEKHG3A1L390 1219 aa22.93■■□□□ 1.26
HERPUD2-201ENST00000311350 RRS1Q15050 365 aaKnown RBP22.93■■□□□ 1.26
HERPUD2-201ENST00000311350 KIAA2012Q0VF49 1180 aa22.92■■□□□ 1.26
HERPUD2-201ENST00000311350 RGPD1P0DJD0 1748 aa22.92■■□□□ 1.26
HERPUD2-201ENST00000311350 OVOS2A0A0J9YW53 1432 aa22.92■■□□□ 1.26
HERPUD2-201ENST00000311350 OVOS2Q6IE36 1432 aa22.92■■□□□ 1.26
HERPUD2-201ENST00000311350 ACEP12821 1306 aa22.92■■□□□ 1.26
HERPUD2-201ENST00000311350 TOPAZ1Q8N9V7 1692 aa22.92■■□□□ 1.26
HERPUD2-201ENST00000311350 EIF4A2Q14240 407 aaKnown RBP22.91■■□□□ 1.26
HERPUD2-201ENST00000311350 UTP14CQ5TAP6 766 aaKnown RBP22.91■■□□□ 1.26
HERPUD2-201ENST00000311350 OTUD7AQ8TE49 926 aaPredicted RBP22.91■■□□□ 1.26
HERPUD2-201ENST00000311350 ATP2B3Q16720 1220 aa22.9■■□□□ 1.26
HERPUD2-201ENST00000311350 OSBPL3Q9H4L5 887 aa22.9■■□□□ 1.26
HERPUD2-201ENST00000311350 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.26
HERPUD2-201ENST00000311350 DCTN1Q14203 1278 aa22.89■■□□□ 1.26
HERPUD2-201ENST00000311350 TTC21BQ7Z4L5 1316 aa22.89■■□□□ 1.26
HERPUD2-201ENST00000311350 CRB1P82279 1406 aa22.89■■□□□ 1.25
HERPUD2-201ENST00000311350 REC8O95072 547 aa22.89■■□□□ 1.25
HERPUD2-201ENST00000311350 TRPC5Q9UL62 973 aaPredicted RBP22.89■■□□□ 1.25
HERPUD2-201ENST00000311350 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
HERPUD2-201ENST00000311350 HMMRO75330 724 aa22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 ALS2Q96Q42 1657 aa22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 ST18O60284 1047 aa22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 SDSP20132 328 aa22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 FOXD4L6Q3SYB3 417 aaPredicted RBP22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 FOXD4L3Q6VB84 417 aaPredicted RBP22.88■■□□□ 1.25
HERPUD2-201ENST00000311350 SULT6B1Q6IMI4 303 aa22.87■■□□□ 1.25
HERPUD2-201ENST00000311350 BCL9LQ86UU0 1499 aa22.87■■□□□ 1.25
HERPUD2-201ENST00000311350 PPP4R3BQ5MIZ7 849 aa22.86■■□□□ 1.25
HERPUD2-201ENST00000311350 TSPY26PQ9H489 355 aa22.86■■□□□ 1.25
HERPUD2-201ENST00000311350 ATRNO75882 1429 aa22.85■■□□□ 1.25
HERPUD2-201ENST00000311350 TTC12Q9H892 705 aaPredicted RBP22.85■■□□□ 1.25
HERPUD2-201ENST00000311350 SLIT2O94813 1529 aa22.84■■□□□ 1.25
HERPUD2-201ENST00000311350 AEBP1Q8IUX7 1158 aa22.84■■□□□ 1.25
HERPUD2-201ENST00000311350 ABCA3Q99758 1704 aa22.84■■□□□ 1.25
HERPUD2-201ENST00000311350 APBB1O00213 710 aa22.84■■□□□ 1.25
HERPUD2-201ENST00000311350 CCT4P50991 539 aaKnown RBP22.84■■□□□ 1.25
HERPUD2-201ENST00000311350 NOLC1Q14978 699 aaKnown RBP eCLIP22.84■■□□□ 1.25
HERPUD2-201ENST00000311350 SPDYE4A6NLX3 237 aa22.83■■□□□ 1.25
HERPUD2-201ENST00000311350 ERC2O15083 957 aa22.83■■□□□ 1.25
HERPUD2-201ENST00000311350 GDPD2Q9HCC8 539 aa22.83■■□□□ 1.25
HERPUD2-201ENST00000311350 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.24
HERPUD2-201ENST00000311350 MEIS3Q99687 375 aa22.83■■□□□ 1.24
HERPUD2-201ENST00000311350 PEAK1Q9H792 1746 aa22.82■■□□□ 1.24
HERPUD2-201ENST00000311350 USP6P35125 1406 aa22.82■■□□□ 1.24
HERPUD2-201ENST00000311350 SMARCA5O60264 1052 aaPredicted RBP22.82■■□□□ 1.24
HERPUD2-201ENST00000311350 GADD45BO75293 160 aaPredicted RBP22.82■■□□□ 1.24
HERPUD2-201ENST00000311350 TPRNQ4KMQ1 711 aa22.82■■□□□ 1.24
HERPUD2-201ENST00000311350 PIBF1Q8WXW3 757 aa22.81■■□□□ 1.24
HERPUD2-201ENST00000311350 USP25Q9UHP3 1055 aa22.81■■□□□ 1.24
HERPUD2-201ENST00000311350 IGSF3O75054 1194 aa22.81■■□□□ 1.24
HERPUD2-201ENST00000311350 FGD1P98174 961 aa22.81■■□□□ 1.24
HERPUD2-201ENST00000311350 MBD3O95983 291 aa22.8■■□□□ 1.24
HERPUD2-201ENST00000311350 MCM2P49736 904 aa22.8■■□□□ 1.24
HERPUD2-201ENST00000311350 SSH2Q76I76 1423 aa22.8■■□□□ 1.24
HERPUD2-201ENST00000311350 NOL8Q76FK4 1167 aaKnown RBP22.8■■□□□ 1.24
HERPUD2-201ENST00000311350 KRT24Q2M2I5 525 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 MCM10Q7L590 875 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 PRIMPOLQ96LW4 560 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 ABTB2Q8N961 1025 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 TMX3Q96JJ7 454 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 BCL2L12Q9HB09 334 aa22.79■■□□□ 1.24
HERPUD2-201ENST00000311350 GTF2F1P35269 517 aaKnown RBP eCLIP22.78■■□□□ 1.24
HERPUD2-201ENST00000311350 IL17RAQ96F46 866 aa22.78■■□□□ 1.24
HERPUD2-201ENST00000311350 SOS1Q07889 1333 aaPredicted RBP22.78■■□□□ 1.24
HERPUD2-201ENST00000311350 KDRP35968 1356 aa22.78■■□□□ 1.24
HERPUD2-201ENST00000311350 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
HERPUD2-201ENST00000311350 PDE1AP54750 535 aa22.77■■□□□ 1.24
HERPUD2-201ENST00000311350 HMGN5P82970 282 aaKnown RBP22.77■■□□□ 1.24
HERPUD2-201ENST00000311350 GJD4Q96KN9 370 aaPredicted RBP22.77■■□□□ 1.24
HERPUD2-201ENST00000311350 TTC21AQ8NDW8 1320 aa22.77■■□□□ 1.24
HERPUD2-201ENST00000311350 SALL3Q9BXA9 1300 aa22.77■■□□□ 1.24
HERPUD2-201ENST00000311350 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.77■■□□□ 1.23
HERPUD2-201ENST00000311350 BRD1O95696 1058 aa22.76■■□□□ 1.23
HERPUD2-201ENST00000311350 NEK4P51957 841 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms