RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PTCH1Q13635 1447 aa21.65■■□□□ 1.06
SPSB4-201ENST00000310546 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
SPSB4-201ENST00000310546 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.65■■□□□ 1.06
SPSB4-201ENST00000310546 PRKAR2BP31323 418 aa21.65■■□□□ 1.06
SPSB4-201ENST00000310546 PDIA4P13667 645 aaKnown RBP21.64■■□□□ 1.06
SPSB4-201ENST00000310546 SRCIN1Q9C0H9 1055 aa21.64■■□□□ 1.06
SPSB4-201ENST00000310546 TWISTNBQ3B726 338 aaPredicted RBP21.64■■□□□ 1.05
SPSB4-201ENST00000310546 INTS4Q96HW7 963 aaKnown RBP21.64■■□□□ 1.05
SPSB4-201ENST00000310546 GOLGA6L6A8MZA4 724 aa21.63■■□□□ 1.05
SPSB4-201ENST00000310546 COG3Q96JB2 828 aa21.63■■□□□ 1.05
SPSB4-201ENST00000310546 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
SPSB4-201ENST00000310546 PTGS1P23219 599 aa21.63■■□□□ 1.05
SPSB4-201ENST00000310546 DDX41Q9UJV9 622 aaKnown RBP21.63■■□□□ 1.05
SPSB4-201ENST00000310546 FIBPO43427 364 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 TSHZ3Q63HK5 1081 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 MAP2P11137 1827 aaKnown RBP21.62■■□□□ 1.05
SPSB4-201ENST00000310546 EDC4Q6P2E9 1401 aaKnown RBP21.62■■□□□ 1.05
SPSB4-201ENST00000310546 ERICH4A6NGS2 130 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 ANO2Q9NQ90 1003 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 TCHHQ07283 1943 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 TPM3P06753 285 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 LMOD2Q6P5Q4 547 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 ANKRD44Q8N8A2 993 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 MBIPQ9NS73 344 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 CCDC66A2RUB6 948 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 MCCP23508 829 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 TERF2Q15554 542 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 PNPLA6Q8IY17 1366 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 UBE2HP62256 183 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 LRMPQ12912 555 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 PHACTR3Q96KR7 559 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 TNNT1P13805 278 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 CEP85Q6P2H3 762 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 DRC7Q8IY82 874 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 NPHP4O75161 1426 aaPredicted RBP21.58■■□□□ 1.05
SPSB4-201ENST00000310546 CCDC112Q8NEF3 446 aa21.58■■□□□ 1.04
SPSB4-201ENST00000310546 KIF18AQ8NI77 898 aa21.58■■□□□ 1.04
SPSB4-201ENST00000310546 ZNF592Q92610 1267 aa21.58■■□□□ 1.04
SPSB4-201ENST00000310546 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 FCHSD2O94868 740 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 TIGD1Q96MW7 591 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 SMTNL1A8MU46 457 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 GNAI1P63096 354 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 AKAP12Q02952 1782 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 CCDC186Q7Z3E2 898 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 MORC2Q9Y6X9 1032 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 TTC21BQ7Z4L5 1316 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 RPAP2Q8IXW5 612 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 LTV1Q96GA3 475 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 KRT24Q2M2I5 525 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 KRT222Q8N1A0 295 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 LARP6Q9BRS8 491 aaKnown RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 ESYT1Q9BSJ8 1104 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 PDE1AP54750 535 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 HSP90AB2PQ58FF8 381 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 TMEM87AQ8NBN3 555 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 FUCA2Q9BTY2 467 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 DTNBO60941 627 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 RILPL2Q969X0 211 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.54■■□□□ 1.04
SPSB4-201ENST00000310546 CHMP3Q9Y3E7 222 aa21.54■■□□□ 1.04
SPSB4-201ENST00000310546 V9GYY5 206 aaPredicted RBP21.54■■□□□ 1.04
SPSB4-201ENST00000310546 TRIM6-TRIM34B2RNG4 842 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 TRERF1Q96PN7 1200 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 ZSCAN22P10073 491 aaPredicted RBP21.53■■□□□ 1.04
SPSB4-201ENST00000310546 NLRP6P59044 892 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 SYCP1Q15431 976 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 AEBP1Q8IUX7 1158 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 NRBP1Q9UHY1 535 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 CCDC192P0DO97 292 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 NFE2L2Q16236 605 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 MEIS3Q99687 375 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 ATP10DQ9P241 1426 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.03
SPSB4-201ENST00000310546 LUZP1Q86V48 1076 aa21.52■■□□□ 1.03
SPSB4-201ENST00000310546 ORAI2Q96SN7 254 aa21.52■■□□□ 1.03
SPSB4-201ENST00000310546 RTL1A6NKG5 1358 aa21.52■■□□□ 1.03
SPSB4-201ENST00000310546 FOXO3O43524 673 aa21.51■■□□□ 1.03
SPSB4-201ENST00000310546 RPAP1Q9BWH6 1393 aaPredicted RBP21.51■■□□□ 1.03
SPSB4-201ENST00000310546 DCTN1Q14203 1278 aa21.51■■□□□ 1.03
SPSB4-201ENST00000310546 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 STX6O43752 255 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 DDX17Q92841 729 aaKnown RBP21.5■■□□□ 1.03
SPSB4-201ENST00000310546 ST7Q9NRC1 585 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 PAXBP1Q9Y5B6 917 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 SYT1P21579 422 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 ANAPC15P60006 121 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 KMT5BQ4FZB7 885 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 RGS12O14924 1447 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 CAMK4Q16566 473 aa21.49■■□□□ 1.03
SPSB4-201ENST00000310546 ABTB2Q8N961 1025 aa21.49■■□□□ 1.03
SPSB4-201ENST00000310546 DNAJC2Q99543 621 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms