RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PTCH1Q13635 1447 aa21.65■■□□□ 1.06
SPSB4-201ENST00000310546 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
SPSB4-201ENST00000310546 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.65■■□□□ 1.06
SPSB4-201ENST00000310546 PRKAR2BP31323 418 aa21.65■■□□□ 1.06
SPSB4-201ENST00000310546 PDIA4P13667 645 aaKnown RBP21.64■■□□□ 1.06
SPSB4-201ENST00000310546 SRCIN1Q9C0H9 1055 aa21.64■■□□□ 1.06
SPSB4-201ENST00000310546 TWISTNBQ3B726 338 aaPredicted RBP21.64■■□□□ 1.05
SPSB4-201ENST00000310546 INTS4Q96HW7 963 aaKnown RBP21.64■■□□□ 1.05
SPSB4-201ENST00000310546 GOLGA6L6A8MZA4 724 aa21.63■■□□□ 1.05
SPSB4-201ENST00000310546 COG3Q96JB2 828 aa21.63■■□□□ 1.05
SPSB4-201ENST00000310546 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
SPSB4-201ENST00000310546 PTGS1P23219 599 aa21.63■■□□□ 1.05
SPSB4-201ENST00000310546 DDX41Q9UJV9 622 aaKnown RBP21.63■■□□□ 1.05
SPSB4-201ENST00000310546 FIBPO43427 364 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 TSHZ3Q63HK5 1081 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 MAP2P11137 1827 aaKnown RBP21.62■■□□□ 1.05
SPSB4-201ENST00000310546 EDC4Q6P2E9 1401 aaKnown RBP21.62■■□□□ 1.05
SPSB4-201ENST00000310546 ERICH4A6NGS2 130 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 ANO2Q9NQ90 1003 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 TCHHQ07283 1943 aa21.62■■□□□ 1.05
SPSB4-201ENST00000310546 TPM3P06753 285 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 LMOD2Q6P5Q4 547 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 ANKRD44Q8N8A2 993 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 MBIPQ9NS73 344 aa21.61■■□□□ 1.05
SPSB4-201ENST00000310546 CCDC66A2RUB6 948 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 MCCP23508 829 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 TERF2Q15554 542 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 PNPLA6Q8IY17 1366 aa21.6■■□□□ 1.05
SPSB4-201ENST00000310546 UBE2HP62256 183 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 LRMPQ12912 555 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 PHACTR3Q96KR7 559 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
SPSB4-201ENST00000310546 TNNT1P13805 278 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 CEP85Q6P2H3 762 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 DRC7Q8IY82 874 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
SPSB4-201ENST00000310546 NPHP4O75161 1426 aaPredicted RBP21.58■■□□□ 1.05
SPSB4-201ENST00000310546 CCDC112Q8NEF3 446 aa21.58■■□□□ 1.04
SPSB4-201ENST00000310546 KIF18AQ8NI77 898 aa21.58■■□□□ 1.04
SPSB4-201ENST00000310546 ZNF592Q92610 1267 aa21.58■■□□□ 1.04
SPSB4-201ENST00000310546 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 FCHSD2O94868 740 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 TIGD1Q96MW7 591 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 SMTNL1A8MU46 457 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 GNAI1P63096 354 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 AKAP12Q02952 1782 aa21.57■■□□□ 1.04
SPSB4-201ENST00000310546 CCDC186Q7Z3E2 898 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 MORC2Q9Y6X9 1032 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 TTC21BQ7Z4L5 1316 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 RPAP2Q8IXW5 612 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 LTV1Q96GA3 475 aaPredicted RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 KRT24Q2M2I5 525 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 KRT222Q8N1A0 295 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 LARP6Q9BRS8 491 aaKnown RBP21.56■■□□□ 1.04
SPSB4-201ENST00000310546 ESYT1Q9BSJ8 1104 aa21.56■■□□□ 1.04
SPSB4-201ENST00000310546 PDE1AP54750 535 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 HSP90AB2PQ58FF8 381 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 TMEM87AQ8NBN3 555 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 FUCA2Q9BTY2 467 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 DTNBO60941 627 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 RILPL2Q969X0 211 aa21.55■■□□□ 1.04
SPSB4-201ENST00000310546 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.54■■□□□ 1.04
SPSB4-201ENST00000310546 CHMP3Q9Y3E7 222 aa21.54■■□□□ 1.04
SPSB4-201ENST00000310546 V9GYY5 206 aaPredicted RBP21.54■■□□□ 1.04
SPSB4-201ENST00000310546 TRIM6-TRIM34B2RNG4 842 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 TRERF1Q96PN7 1200 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 ZSCAN22P10073 491 aaPredicted RBP21.53■■□□□ 1.04
SPSB4-201ENST00000310546 NLRP6P59044 892 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 SYCP1Q15431 976 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 AEBP1Q8IUX7 1158 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 NRBP1Q9UHY1 535 aa21.53■■□□□ 1.04
SPSB4-201ENST00000310546 CCDC192P0DO97 292 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 NFE2L2Q16236 605 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 MEIS3Q99687 375 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 ATP10DQ9P241 1426 aa21.52■■□□□ 1.04
SPSB4-201ENST00000310546 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.03
SPSB4-201ENST00000310546 LUZP1Q86V48 1076 aa21.52■■□□□ 1.03
SPSB4-201ENST00000310546 ORAI2Q96SN7 254 aa21.52■■□□□ 1.03
SPSB4-201ENST00000310546 RTL1A6NKG5 1358 aa21.52■■□□□ 1.03
SPSB4-201ENST00000310546 FOXO3O43524 673 aa21.51■■□□□ 1.03
SPSB4-201ENST00000310546 RPAP1Q9BWH6 1393 aaPredicted RBP21.51■■□□□ 1.03
SPSB4-201ENST00000310546 DCTN1Q14203 1278 aa21.51■■□□□ 1.03
SPSB4-201ENST00000310546 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 STX6O43752 255 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 DDX17Q92841 729 aaKnown RBP21.5■■□□□ 1.03
SPSB4-201ENST00000310546 ST7Q9NRC1 585 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 PAXBP1Q9Y5B6 917 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 SYT1P21579 422 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 ANAPC15P60006 121 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 KMT5BQ4FZB7 885 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 RGS12O14924 1447 aa21.5■■□□□ 1.03
SPSB4-201ENST00000310546 CAMK4Q16566 473 aa21.49■■□□□ 1.03
SPSB4-201ENST00000310546 ABTB2Q8N961 1025 aa21.49■■□□□ 1.03
SPSB4-201ENST00000310546 DNAJC2Q99543 621 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms