RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 GNAI2P04899 355 aa13.91□□□□□ -0.18
TRIM59-201ENST00000309784 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
TRIM59-201ENST00000309784 PIGBQ92521 554 aa13.9□□□□□ -0.18
TRIM59-201ENST00000309784 A1BGP04217 495 aa13.9□□□□□ -0.19
TRIM59-201ENST00000309784 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
TRIM59-201ENST00000309784 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
TRIM59-201ENST00000309784 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
TRIM59-201ENST00000309784 RTL5Q5HYW3 569 aaPredicted RBP13.89□□□□□ -0.19
TRIM59-201ENST00000309784 FAM182BQ5T319 152 aa13.89□□□□□ -0.19
TRIM59-201ENST00000309784 CRYBG1Q9Y4K1 1723 aa13.89□□□□□ -0.19
TRIM59-201ENST00000309784 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
TRIM59-201ENST00000309784 KSR2Q6VAB6 950 aa13.89□□□□□ -0.19
TRIM59-201ENST00000309784 MYD88Q99836 296 aa13.89□□□□□ -0.19
TRIM59-201ENST00000309784 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
TRIM59-201ENST00000309784 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
TRIM59-201ENST00000309784 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
TRIM59-201ENST00000309784 CWF19L2Q2TBE0 894 aaKnown RBP13.88□□□□□ -0.19
TRIM59-201ENST00000309784 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
TRIM59-201ENST00000309784 COL16A1Q07092 1604 aaPredicted RBP13.88□□□□□ -0.19
TRIM59-201ENST00000309784 ZBTB3Q9H5J0 574 aa13.88□□□□□ -0.19
TRIM59-201ENST00000309784 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
TRIM59-201ENST00000309784 STARD3NLO95772 234 aa13.88□□□□□ -0.19
TRIM59-201ENST00000309784 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
TRIM59-201ENST00000309784 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
TRIM59-201ENST00000309784 ANKRD13DQ6ZTN6 518 aa13.87□□□□□ -0.19
TRIM59-201ENST00000309784 ABCA3Q99758 1704 aa13.87□□□□□ -0.19
TRIM59-201ENST00000309784 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
TRIM59-201ENST00000309784 AFF2P51816 1311 aa13.87□□□□□ -0.19
TRIM59-201ENST00000309784 ATP5J2-PTCD1G3V325 749 aa13.87□□□□□ -0.19
TRIM59-201ENST00000309784 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
TRIM59-201ENST00000309784 PDE4AP27815 886 aa13.86□□□□□ -0.19
TRIM59-201ENST00000309784 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
TRIM59-201ENST00000309784 JARID2Q92833 1246 aaPredicted RBP13.86□□□□□ -0.19
TRIM59-201ENST00000309784 CHMP3Q9Y3E7 222 aa13.86□□□□□ -0.19
TRIM59-201ENST00000309784 GCC1Q96CN9 775 aa13.85□□□□□ -0.19
TRIM59-201ENST00000309784 MARCH10Q8NA82 808 aaPredicted RBP13.85□□□□□ -0.19
TRIM59-201ENST00000309784 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
TRIM59-201ENST00000309784 EXOC6BQ9Y2D4 811 aa13.85□□□□□ -0.19
TRIM59-201ENST00000309784 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
TRIM59-201ENST00000309784 VPS72Q15906 364 aa13.84□□□□□ -0.19
TRIM59-201ENST00000309784 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
TRIM59-201ENST00000309784 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
TRIM59-201ENST00000309784 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
TRIM59-201ENST00000309784 ATP6V1AP38606 617 aa13.84□□□□□ -0.19
TRIM59-201ENST00000309784 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
TRIM59-201ENST00000309784 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
TRIM59-201ENST00000309784 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
TRIM59-201ENST00000309784 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
TRIM59-201ENST00000309784 TEX13AQ9BXU3 409 aaPredicted RBP13.83□□□□□ -0.2
TRIM59-201ENST00000309784 HDAC5Q9UQL6 1122 aa13.83□□□□□ -0.2
TRIM59-201ENST00000309784 USP44Q9H0E7 712 aa13.83□□□□□ -0.2
TRIM59-201ENST00000309784 KCNQ2O43526 872 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
TRIM59-201ENST00000309784 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
TRIM59-201ENST00000309784 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
TRIM59-201ENST00000309784 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
TRIM59-201ENST00000309784 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
TRIM59-201ENST00000309784 RGS12O14924 1447 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
TRIM59-201ENST00000309784 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
TRIM59-201ENST00000309784 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
TRIM59-201ENST00000309784 PDIA6Q15084 440 aa13.81□□□□□ -0.2
TRIM59-201ENST00000309784 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
TRIM59-201ENST00000309784 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 PPP1R42Q7Z4L9 355 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 ADCY9O60503 1353 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 A0A087WZG4 1122 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 GRM8O00222 908 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
TRIM59-201ENST00000309784 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 KCNQ4P56696 695 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 NBPF14Q5TI25 921 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 NBPF10Q6P3W6 841 aaKnown RBP13.8□□□□□ -0.2
TRIM59-201ENST00000309784 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
TRIM59-201ENST00000309784 PNMA6EA0A0J9YXQ4 647 aa13.79□□□□□ -0.2
TRIM59-201ENST00000309784 METTL22Q9BUU2 404 aaPredicted RBP13.79□□□□□ -0.2
TRIM59-201ENST00000309784 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
TRIM59-201ENST00000309784 GPTP24298 496 aa13.79□□□□□ -0.2
TRIM59-201ENST00000309784 UPF2Q9HAU5 1272 aaKnown RBP13.79□□□□□ -0.2
TRIM59-201ENST00000309784 TBC1D2BQ9UPU7 963 aa13.79□□□□□ -0.2
TRIM59-201ENST00000309784 SLIT2O94813 1529 aa13.79□□□□□ -0.2
TRIM59-201ENST00000309784 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
TRIM59-201ENST00000309784 NUCB1Q02818 461 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 IL1RAPL2Q9NP60 686 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 ATP8B2P98198 1209 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 SEPT12Q8IYM1 358 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 SIL1Q9H173 461 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 ZBTB1Q9Y2K1 713 aa13.78□□□□□ -0.2
TRIM59-201ENST00000309784 DISP2A7MBM2 1401 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms