RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 APBA3O96018 575 aa10.7□□□□□ -0.7
CHD6-201ENST00000309279 CABP4P57796 275 aa10.7□□□□□ -0.7
CHD6-201ENST00000309279 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
CHD6-201ENST00000309279 SETQ01105 290 aaPredicted RBP10.69□□□□□ -0.7
CHD6-201ENST00000309279 LMOD3Q0VAK6 560 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 DCTN1Q14203 1278 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 MCM10Q7L590 875 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 CAMKK2Q96RR4 588 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 SLC24A3Q9HC58 644 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
CHD6-201ENST00000309279 LY75O60449 1722 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 BAG6P46379 1132 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 TEFQ10587 303 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 PLCD4Q9BRC7 762 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
CHD6-201ENST00000309279 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
CHD6-201ENST00000309279 DEFB132Q7Z7B7 95 aa10.68□□□□□ -0.7
CHD6-201ENST00000309279 PROM2Q8N271 834 aa10.68□□□□□ -0.7
CHD6-201ENST00000309279 NGEFQ8N5V2 710 aa10.68□□□□□ -0.7
CHD6-201ENST00000309279 SMARCC1Q92922 1105 aaPredicted RBP10.68□□□□□ -0.7
CHD6-201ENST00000309279 ATG3Q9NT62 314 aa10.68□□□□□ -0.7
CHD6-201ENST00000309279 ASAP1Q9ULH1 1129 aa10.68□□□□□ -0.7
CHD6-201ENST00000309279 PAPPAQ13219 1627 aa10.67□□□□□ -0.7
CHD6-201ENST00000309279 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
CHD6-201ENST00000309279 THUMPD2Q9BTF0 503 aaKnown RBP10.66□□□□□ -0.7
CHD6-201ENST00000309279 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 PALLDQ8WX93 1383 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 UBR2Q8IWV8 1755 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 KDM4AO75164 1064 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 EZH2Q15910 746 aaKnown RBP10.66□□□□□ -0.7
CHD6-201ENST00000309279 SLC27A3Q5K4L6 730 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 ZNF790Q6PG37 636 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 WWC1Q8IX03 1113 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 BABAM1Q9NWV8 329 aa10.66□□□□□ -0.7
CHD6-201ENST00000309279 RREB1Q92766 1687 aa10.65□□□□□ -0.7
CHD6-201ENST00000309279 BTBD11A6QL63 1104 aa10.65□□□□□ -0.7
CHD6-201ENST00000309279 TXNRD1Q16881 649 aa10.65□□□□□ -0.7
CHD6-201ENST00000309279 LOC102724428A0A0B4J2F2 783 aa10.64□□□□□ -0.71
CHD6-201ENST00000309279 SIK1P57059 783 aa10.64□□□□□ -0.71
CHD6-201ENST00000309279 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
CHD6-201ENST00000309279 SLC39A6Q13433 755 aa10.64□□□□□ -0.71
CHD6-201ENST00000309279 LRRC4BQ9NT99 713 aa10.64□□□□□ -0.71
CHD6-201ENST00000309279 KDM3BQ7LBC6 1761 aa10.64□□□□□ -0.71
CHD6-201ENST00000309279 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
CHD6-201ENST00000309279 KCPQ6ZWJ8 1503 aa10.63□□□□□ -0.71
CHD6-201ENST00000309279 CICQ96RK0 1608 aaPredicted RBP10.63□□□□□ -0.71
CHD6-201ENST00000309279 CHL1O00533 1208 aa10.63□□□□□ -0.71
CHD6-201ENST00000309279 ZNF853P0CG23 659 aa10.63□□□□□ -0.71
CHD6-201ENST00000309279 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
CHD6-201ENST00000309279 CALD1Q05682 793 aaKnown RBP10.63□□□□□ -0.71
CHD6-201ENST00000309279 SLC4A9Q96Q91 983 aa10.63□□□□□ -0.71
CHD6-201ENST00000309279 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
CHD6-201ENST00000309279 NUP188Q5SRE5 1749 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 WDR63Q8IWG1 891 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 TTC5Q8N0Z6 440 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 ZC3H15Q8WU90 426 aaKnown RBP10.62□□□□□ -0.71
CHD6-201ENST00000309279 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 CCNL1Q9UK58 526 aaPredicted RBP10.62□□□□□ -0.71
CHD6-201ENST00000309279 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 KCNQ3O43525 872 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 PTCD1O75127 700 aaKnown RBP10.62□□□□□ -0.71
CHD6-201ENST00000309279 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
CHD6-201ENST00000309279 ZNF496Q96IT1 587 aaPredicted RBP10.62□□□□□ -0.71
CHD6-201ENST00000309279 IFT57Q9NWB7 429 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 IL16Q14005 1332 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 HEG1Q9ULI3 1381 aa10.62□□□□□ -0.71
CHD6-201ENST00000309279 MAFGO15525 162 aa10.61□□□□□ -0.71
CHD6-201ENST00000309279 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
CHD6-201ENST00000309279 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
CHD6-201ENST00000309279 CNPY4Q8N129 248 aa10.61□□□□□ -0.71
CHD6-201ENST00000309279 FMNL2Q96PY5 1086 aa10.61□□□□□ -0.71
CHD6-201ENST00000309279 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
CHD6-201ENST00000309279 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
CHD6-201ENST00000309279 C5P01031 1676 aa10.61□□□□□ -0.71
CHD6-201ENST00000309279 COL5A3P25940 1745 aaPredicted RBP10.6□□□□□ -0.71
CHD6-201ENST00000309279 KCNQ4P56696 695 aa10.6□□□□□ -0.71
CHD6-201ENST00000309279 EIF4A1P60842 406 aaKnown RBP10.6□□□□□ -0.71
CHD6-201ENST00000309279 GNAI1P63096 354 aa10.6□□□□□ -0.71
CHD6-201ENST00000309279 ITPK1Q13572 414 aa10.6□□□□□ -0.71
CHD6-201ENST00000309279 TSPYL4Q9UJ04 414 aa10.6□□□□□ -0.71
CHD6-201ENST00000309279 TJP1Q07157 1748 aa10.6□□□□□ -0.71
CHD6-201ENST00000309279 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
CHD6-201ENST00000309279 MYH14Q7Z406 1995 aaKnown RBP10.59□□□□□ -0.71
CHD6-201ENST00000309279 GIGYF1O75420 1035 aaPredicted RBP10.58□□□□□ -0.72
CHD6-201ENST00000309279 PTMSP20962 102 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 AKT1S1Q96B36 256 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
CHD6-201ENST00000309279 LAS1LQ9Y4W2 734 aaKnown RBP10.58□□□□□ -0.72
CHD6-201ENST00000309279 C4BP0C0L5 1744 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 SNRPA1P09661 255 aaKnown RBP10.58□□□□□ -0.72
CHD6-201ENST00000309279 ANAPC15P60006 121 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 MAPK8IP2Q13387 824 aaPredicted RBP10.58□□□□□ -0.72
CHD6-201ENST00000309279 RC3H1Q5TC82 1133 aaKnown RBP10.58□□□□□ -0.72
CHD6-201ENST00000309279 NBPF14Q5TI25 921 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 DNAJC10Q8IXB1 793 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 LINC00116Q8NCU8 138 aa10.58□□□□□ -0.72
CHD6-201ENST00000309279 CNTNAP4Q9C0A0 1308 aa10.57□□□□□ -0.72
CHD6-201ENST00000309279 CYP19A1P11511 503 aaPredicted RBP10.57□□□□□ -0.72
CHD6-201ENST00000309279 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
CHD6-201ENST00000309279 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms