RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 LRRFIP2Q9Y608 721 aaKnown RBP28.01■■■□□ 2.07
PDLIM2-202ENST00000308354 PIP4K2AP48426 406 aaPredicted RBP28■■■□□ 2.07
PDLIM2-202ENST00000308354 DDX21Q9NR30 783 aaKnown RBP eCLIP28■■■□□ 2.07
PDLIM2-202ENST00000308354 MAP3K2Q9Y2U5 619 aa28■■■□□ 2.07
PDLIM2-202ENST00000308354 C5P01031 1676 aa28■■■□□ 2.07
PDLIM2-202ENST00000308354 FMNL2Q96PY5 1086 aa28■■■□□ 2.07
PDLIM2-202ENST00000308354 HYPKQ9NX55 129 aa28■■■□□ 2.07
PDLIM2-202ENST00000308354 SLC4A3P48751 1232 aa27.99■■■□□ 2.07
PDLIM2-202ENST00000308354 NBR1Q14596 966 aa27.99■■■□□ 2.07
PDLIM2-202ENST00000308354 SNRPA1P09661 255 aaKnown RBP27.99■■■□□ 2.07
PDLIM2-202ENST00000308354 UBTFL1P0CB47 393 aaPredicted RBP27.99■■■□□ 2.07
PDLIM2-202ENST00000308354 NKX1-1Q15270 411 aaPredicted RBP27.98■■■□□ 2.07
PDLIM2-202ENST00000308354 COL16A1Q07092 1604 aaPredicted RBP27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 PNMA6EA0A0J9YXQ4 647 aa27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 SMARCA5O60264 1052 aaPredicted RBP27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 HMMRO75330 724 aa27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 NBPF7P0C2Y1 421 aaPredicted RBP27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 C16orf71Q8IYS4 520 aaPredicted RBP27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 COL22A1Q8NFW1 1626 aaPredicted RBP27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 COL14A1Q05707 1796 aaKnown RBP27.97■■■□□ 2.07
PDLIM2-202ENST00000308354 NUTM2BA6NNL0 878 aaPredicted RBP27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 NUTM2EB1AL46 878 aaPredicted RBP27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 ERVV-2B6SEH9 535 aa27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 TOM1O60784 492 aa27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 KSR2Q6VAB6 950 aa27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 NUTM2AQ8IVF1 878 aaPredicted RBP27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 PHLPP1O60346 1717 aa27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 SHANK3Q9BYB0 1731 aa27.96■■■□□ 2.07
PDLIM2-202ENST00000308354 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
PDLIM2-202ENST00000308354 CWF19L2Q2TBE0 894 aaKnown RBP27.94■■■□□ 2.06
PDLIM2-202ENST00000308354 EXOC6BQ9Y2D4 811 aa27.94■■■□□ 2.06
PDLIM2-202ENST00000308354 ATP8B2P98198 1209 aa27.93■■■□□ 2.06
PDLIM2-202ENST00000308354 DAXXQ9UER7 740 aaPredicted RBP27.93■■■□□ 2.06
PDLIM2-202ENST00000308354 PTCD1O75127 700 aaKnown RBP27.92■■■□□ 2.06
PDLIM2-202ENST00000308354 OTUD7AQ8TE49 926 aaPredicted RBP27.92■■■□□ 2.06
PDLIM2-202ENST00000308354 XAGE3Q8WTP9 111 aa27.92■■■□□ 2.06
PDLIM2-202ENST00000308354 COPS6Q7L5N1 327 aa27.91■■■□□ 2.06
PDLIM2-202ENST00000308354 UPF2Q9HAU5 1272 aaKnown RBP27.91■■■□□ 2.06
PDLIM2-202ENST00000308354 DDX58O95786 925 aaKnown RBP27.9■■■□□ 2.06
PDLIM2-202ENST00000308354 UBAP1LF5GYI3 381 aa27.9■■■□□ 2.06
PDLIM2-202ENST00000308354 RIC3Q7Z5B4 369 aa27.9■■■□□ 2.06
PDLIM2-202ENST00000308354 PLEKHM2Q8IWE5 1019 aa27.9■■■□□ 2.06
PDLIM2-202ENST00000308354 LRP10Q7Z4F1 713 aa27.88■■■□□ 2.05
PDLIM2-202ENST00000308354 TBC1D32Q96NH3 1257 aa27.88■■■□□ 2.05
PDLIM2-202ENST00000308354 BMP2KLQ5H9B9 411 aa27.87■■■□□ 2.05
PDLIM2-202ENST00000308354 TMOD3Q9NYL9 352 aa27.87■■■□□ 2.05
PDLIM2-202ENST00000308354 PPP1R42Q7Z4L9 355 aa27.87■■■□□ 2.05
PDLIM2-202ENST00000308354 C9orf78Q9NZ63 289 aaPredicted RBP27.87■■■□□ 2.05
PDLIM2-202ENST00000308354 DISP2A7MBM2 1401 aa27.87■■■□□ 2.05
PDLIM2-202ENST00000308354 GLI3P10071 1580 aa27.87■■■□□ 2.05
PDLIM2-202ENST00000308354 ALDH1L1O75891 902 aa27.85■■■□□ 2.05
PDLIM2-202ENST00000308354 TOGARAM1Q9Y4F4 1720 aa27.85■■■□□ 2.05
PDLIM2-202ENST00000308354 LINS1Q8NG48 757 aa27.84■■■□□ 2.05
PDLIM2-202ENST00000308354 PIGBQ92521 554 aa27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 EXOC5O00471 708 aa27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 SRGAP3O43295 1099 aa27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 IGKV5-2P06315 115 aa27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 GSPT1P15170 499 aaKnown RBP27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 MFAP1P55081 439 aaKnown RBP27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 ANKRD13DQ6ZTN6 518 aa27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 ASAP1Q9ULH1 1129 aa27.83■■■□□ 2.05
PDLIM2-202ENST00000308354 KCPQ6ZWJ8 1503 aa27.83■■■□□ 2.04
PDLIM2-202ENST00000308354 NBPF26B4DH59 902 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 NBPF14Q5TI25 921 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 NBPF10Q6P3W6 841 aaKnown RBP27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 NBPF15Q8N660 670 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 SSH3Q8TE77 659 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 PLCH1Q4KWH8 1693 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 A1BGP04217 495 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 MYD88Q99836 296 aa27.82■■■□□ 2.04
PDLIM2-202ENST00000308354 LRRCC1Q9C099 1032 aa27.8■■■□□ 2.04
PDLIM2-202ENST00000308354 UBR2Q8IWV8 1755 aa27.79■■■□□ 2.04
PDLIM2-202ENST00000308354 GRM8O00222 908 aa27.79■■■□□ 2.04
PDLIM2-202ENST00000308354 NEXNQ0ZGT2 675 aa27.79■■■□□ 2.04
PDLIM2-202ENST00000308354 METTL22Q9BUU2 404 aaPredicted RBP27.79■■■□□ 2.04
PDLIM2-202ENST00000308354 SPATA31A1Q5TZJ5 1347 aa27.79■■■□□ 2.04
PDLIM2-202ENST00000308354 IBTKQ9P2D0 1353 aaPredicted RBP27.78■■■□□ 2.04
PDLIM2-202ENST00000308354 SURF6O75683 361 aaKnown RBP27.78■■■□□ 2.04
PDLIM2-202ENST00000308354 POLA2Q14181 598 aa27.78■■■□□ 2.04
PDLIM2-202ENST00000308354 SYTL4Q96C24 671 aaPredicted RBP27.78■■■□□ 2.04
PDLIM2-202ENST00000308354 CCDC9Q9Y3X0 531 aaKnown RBP27.78■■■□□ 2.04
PDLIM2-202ENST00000308354 TTC22Q5TAA0 569 aa27.77■■■□□ 2.04
PDLIM2-202ENST00000308354 TNS2Q63HR2 1409 aa27.77■■■□□ 2.04
PDLIM2-202ENST00000308354 PAPPAQ13219 1627 aa27.77■■■□□ 2.04
PDLIM2-202ENST00000308354 KAT6BQ8WYB5 2073 aa27.77■■■□□ 2.04
PDLIM2-202ENST00000308354 NEURL1BA8MQ27 555 aa27.77■■■□□ 2.04
PDLIM2-202ENST00000308354 LAMB4A4D0S4 1761 aa27.76■■■□□ 2.04
PDLIM2-202ENST00000308354 ATG3Q9NT62 314 aa27.76■■■□□ 2.04
PDLIM2-202ENST00000308354 TSHZ3Q63HK5 1081 aa27.76■■■□□ 2.03
PDLIM2-202ENST00000308354 SUCLG2Q96I99 432 aa27.76■■■□□ 2.03
PDLIM2-202ENST00000308354 C22orf23Q9BZE7 217 aa27.76■■■□□ 2.03
PDLIM2-202ENST00000308354 JARID2Q92833 1246 aaPredicted RBP27.75■■■□□ 2.03
PDLIM2-202ENST00000308354 ATP5J2-PTCD1G3V325 749 aa27.75■■■□□ 2.03
PDLIM2-202ENST00000308354 TTLL7Q6ZT98 887 aa27.75■■■□□ 2.03
PDLIM2-202ENST00000308354 RBM42Q9BTD8 480 aaKnown RBP27.75■■■□□ 2.03
PDLIM2-202ENST00000308354 IL1RAPL2Q9NP60 686 aa27.75■■■□□ 2.03
PDLIM2-202ENST00000308354 TBC1D9Q6ZT07 1266 aa27.74■■■□□ 2.03
PDLIM2-202ENST00000308354 KAZALD1Q96I82 304 aa27.74■■■□□ 2.03
PDLIM2-202ENST00000308354 GCKRQ14397 625 aa27.73■■■□□ 2.03
PDLIM2-202ENST00000308354 RTL5Q5HYW3 569 aaPredicted RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms