RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 KIF1BPQ96EK5 621 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 RNF17Q9BXT8 1623 aaKnown RBP9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 SEPT7Q16181 437 aaKnown RBP9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 JMYQ8N9B5 988 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 DCAF5Q96JK2 942 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 ERVK-7P63135 1459 aa9.84□□□□□ -0.83
PCDHB1-201ENST00000306549 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 MNS1Q8NEH6 495 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 CWC25Q9NXE8 425 aaPredicted RBP9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 SLC4A3P48751 1232 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 CCDC152Q4G0S7 254 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 TMEM87AQ8NBN3 555 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 SETDB2Q96T68 719 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 PPM1FP49593 454 aaPredicted RBP9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 FILIP1LQ4L180 1135 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 ANKRD18BA2A2Z9 1011 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 KIF24Q5T7B8 1368 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 NME9Q86XW9 330 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 BAG3O95817 575 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 SBNO1A3KN83 1393 aa9.83□□□□□ -0.84
PCDHB1-201ENST00000306549 GSTO1P78417 241 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 RTCBQ9Y3I0 505 aaKnown RBP9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 ABCC3O15438 1527 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 RBM5P52756 815 aaKnown RBP eCLIP9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 IP6K1Q92551 441 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 A2ML1A8K2U0 1454 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 EXOSC9Q06265 439 aaKnown RBP9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 CCDC196A0A1B0GTZ2 297 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 LRP2BPQ9P2M1 347 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 CDC42BPGQ6DT37 1551 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 PTCD1O75127 700 aaKnown RBP9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 WASF1Q92558 559 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 CRBNQ96SW2 442 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 FAM135BQ49AJ0 1406 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 MAP3K12Q12852 859 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 DHX8Q14562 1220 aaKnown RBP9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 METTL24Q5JXM2 366 aa9.82□□□□□ -0.84
PCDHB1-201ENST00000306549 VPS37CA5D8V6 355 aaPredicted RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 SRGAP3O43295 1099 aa9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 AGLP35573 1532 aa9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 ATP7BP35670 1465 aa9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 MVPQ14764 893 aaKnown RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 GCP02774 474 aa9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 RNF41Q9H4P4 317 aaPredicted RBP9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 KIAA1210Q9ULL0 1709 aa9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 CCDC178Q5BJE1 867 aa9.81□□□□□ -0.84
PCDHB1-201ENST00000306549 STIM1Q13586 685 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 RTL1A6NKG5 1358 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 CCP110O43303 1012 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 DNAJC2Q99543 621 aaKnown RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 NOB1Q9ULX3 412 aaKnown RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 MTMR7Q9Y216 660 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 MAP3K4Q9Y6R4 1608 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 MBD5Q9P267 1494 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 TRMT112Q9UI30 125 aaKnown RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 HOOK2Q96ED9 719 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 ZNHIT6Q9NWK9 470 aaKnown RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 ATP2B2Q01814 1243 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 NBPF6Q5VWK0 638 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 NBPF5PQ86XG9 351 aaPredicted RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 NBPF4Q96M43 638 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 POLR1AO95602 1720 aaPredicted RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 OGFOD1Q8N543 542 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 POLR3AO14802 1390 aaPredicted RBP9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 EHMT1Q9H9B1 1298 aa9.8□□□□□ -0.84
PCDHB1-201ENST00000306549 HOXB7P09629 217 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 HDAC9Q9UKV0 1011 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 HMGB1P09429 215 aaKnown RBP9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 TNIP1Q15025 636 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 DNAAF4Q8WXU2 420 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 DZIP1Q86YF9 867 aaKnown RBP9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 ADGRB3O60242 1522 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 RIMS1Q86UR5 1692 aaKnown RBP9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 SDF4Q9BRK5 362 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 STK32BQ9NY57 414 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 ANKARQ7Z5J8 1434 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 ARHGEF40Q8TER5 1519 aa9.79□□□□□ -0.84
PCDHB1-201ENST00000306549 C16orf71Q8IYS4 520 aaPredicted RBP9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 MAP3K5Q99683 1374 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 NF2P35240 595 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 ARHGAP45Q92619 1136 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 QRICH2Q9H0J4 1663 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 PLCG2P16885 1265 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 ATP6V1AP38606 617 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 IPO9Q96P70 1041 aaKnown RBP9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 EYA3Q99504 573 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 B4DLN1 442 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 MRPL12P52815 198 aaKnown RBP9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 RABEP1Q15276 862 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms