RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.54
PPP4R4-201ENST00000304338 ZCRB1Q8TBF4 217 aaKnown RBP18.45■□□□□ 0.54
PPP4R4-201ENST00000304338 FMNL2Q96PY5 1086 aa18.45■□□□□ 0.54
PPP4R4-201ENST00000304338 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
PPP4R4-201ENST00000304338 CHMP5Q9NZZ3 219 aa18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 ERC2O15083 957 aa18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 NUTM2BA6NNL0 878 aaPredicted RBP18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 NUTM2EB1AL46 878 aaPredicted RBP18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 NUTM2AQ8IVF1 878 aaPredicted RBP18.44■□□□□ 0.54
PPP4R4-201ENST00000304338 ADAMTS2O95450 1211 aa18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 SNRPA1P09661 255 aaKnown RBP18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 RHPN1Q8TCX5 695 aa18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 ST18O60284 1047 aa18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 GPATCH3Q96I76 525 aa18.43■□□□□ 0.54
PPP4R4-201ENST00000304338 NCLP19338 710 aaKnown RBP18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 SPATA31A3Q5VYP0 1347 aa18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 DDX21Q9NR30 783 aaKnown RBP eCLIP18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 BEND3Q5T5X7 828 aa18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 ANKRD13DQ6ZTN6 518 aa18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 AACSQ86V21 672 aa18.42■□□□□ 0.54
PPP4R4-201ENST00000304338 HOXB7P09629 217 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 PIP4K2BP78356 416 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 DIAPH3Q9NSV4 1193 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 CYP27B1O15528 508 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 NEK4P51957 841 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 GSE1Q14687 1217 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 UBE3BQ7Z3V4 1068 aa18.41■□□□□ 0.54
PPP4R4-201ENST00000304338 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
PPP4R4-201ENST00000304338 CCDC8Q9H0W5 538 aaPredicted RBP18.4■□□□□ 0.54
PPP4R4-201ENST00000304338 DLG5Q8TDM6 1919 aa18.4■□□□□ 0.54
PPP4R4-201ENST00000304338 GRM8O00222 908 aa18.4■□□□□ 0.54
PPP4R4-201ENST00000304338 KLHDC4Q8TBB5 520 aa18.4■□□□□ 0.54
PPP4R4-201ENST00000304338 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
PPP4R4-201ENST00000304338 NRKQ7Z2Y5 1582 aa18.39■□□□□ 0.54
PPP4R4-201ENST00000304338 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
PPP4R4-201ENST00000304338 LINS1Q8NG48 757 aa18.39■□□□□ 0.53
PPP4R4-201ENST00000304338 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
PPP4R4-201ENST00000304338 A0A087WZG4 1122 aa18.38■□□□□ 0.53
PPP4R4-201ENST00000304338 K7ELQ4 463 aaPredicted RBP18.38■□□□□ 0.53
PPP4R4-201ENST00000304338 IL2RBP14784 551 aa18.38■□□□□ 0.53
PPP4R4-201ENST00000304338 TOPAZ1Q8N9V7 1692 aa18.38■□□□□ 0.53
PPP4R4-201ENST00000304338 RGS12O14924 1447 aa18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 RABEP1Q15276 862 aa18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 FOXD4L6Q3SYB3 417 aaPredicted RBP18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 FOXD4L3Q6VB84 417 aaPredicted RBP18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 BICC1Q9H694 974 aaKnown RBP18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
PPP4R4-201ENST00000304338 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
PPP4R4-201ENST00000304338 FMN2Q9NZ56 1722 aa18.36■□□□□ 0.53
PPP4R4-201ENST00000304338 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
PPP4R4-201ENST00000304338 NEUROD6Q96NK8 337 aa18.36■□□□□ 0.53
PPP4R4-201ENST00000304338 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
PPP4R4-201ENST00000304338 A1BGP04217 495 aa18.36■□□□□ 0.53
PPP4R4-201ENST00000304338 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
PPP4R4-201ENST00000304338 ALDH1L1O75891 902 aa18.35■□□□□ 0.53
PPP4R4-201ENST00000304338 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
PPP4R4-201ENST00000304338 SUCLG2Q96I99 432 aa18.35■□□□□ 0.53
PPP4R4-201ENST00000304338 SSH3Q8TE77 659 aa18.35■□□□□ 0.53
PPP4R4-201ENST00000304338 PXDNQ92626 1479 aa18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 MST1RQ04912 1400 aa18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 BOLA2Q9H3K6 86 aa18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 FAM177BA6PVY3 158 aa18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 GBP4Q96PP9 640 aa18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
PPP4R4-201ENST00000304338 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.53
PPP4R4-201ENST00000304338 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.53
PPP4R4-201ENST00000304338 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.53
PPP4R4-201ENST00000304338 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
PPP4R4-201ENST00000304338 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
PPP4R4-201ENST00000304338 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
PPP4R4-201ENST00000304338 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
PPP4R4-201ENST00000304338 FSD1Q9BTV5 496 aa18.32■□□□□ 0.52
PPP4R4-201ENST00000304338 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
PPP4R4-201ENST00000304338 LARP6Q9BRS8 491 aaKnown RBP18.31■□□□□ 0.52
PPP4R4-201ENST00000304338 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
PPP4R4-201ENST00000304338 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
PPP4R4-201ENST00000304338 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
PPP4R4-201ENST00000304338 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
PPP4R4-201ENST00000304338 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
PPP4R4-201ENST00000304338 GLRX3O76003 335 aaKnown RBP18.3■□□□□ 0.52
PPP4R4-201ENST00000304338 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
PPP4R4-201ENST00000304338 CHMLP26374 656 aa18.3■□□□□ 0.52
PPP4R4-201ENST00000304338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.526e-7■■■■□ 24.5
PPP4R4-201ENST00000304338 ADCY9O60503 1353 aa18.3■□□□□ 0.52
PPP4R4-201ENST00000304338 MCM4P33991 863 aa18.29■□□□□ 0.52
PPP4R4-201ENST00000304338 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
PPP4R4-201ENST00000304338 RUFY2Q8WXA3 655 aa18.29■□□□□ 0.52
PPP4R4-201ENST00000304338 GCKRQ14397 625 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms