RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 ZHX3Q9H4I2 956 aa10.11□□□□□ -0.79
SCN11A-201ENST00000302328 RIMBP2O15034 1052 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 TTF1Q15361 905 aaPredicted RBP10.1□□□□□ -0.79
SCN11A-201ENST00000302328 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 VTI1AQ96AJ9 217 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 VEZTQ9HBM0 779 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 NOL7Q9UMY1 257 aaKnown RBP10.1□□□□□ -0.79
SCN11A-201ENST00000302328 ADGBQ8N7X0 1667 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
SCN11A-201ENST00000302328 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 CDKL5O76039 1030 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 ANKRD1Q15327 319 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 MVPQ14764 893 aaKnown RBP10.1□□□□□ -0.79
SCN11A-201ENST00000302328 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 UGGT1Q9NYU2 1555 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 KIF1BPQ96EK5 621 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 FLT4P35916 1363 aa10.1□□□□□ -0.79
SCN11A-201ENST00000302328 TRIM21P19474 475 aaKnown RBP10.09□□□□□ -0.79
SCN11A-201ENST00000302328 NFATC2IPQ8NCF5 419 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 IP6K1Q92551 441 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 NAPBQ9H115 298 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 IPO7O95373 1038 aaKnown RBP10.09□□□□□ -0.79
SCN11A-201ENST00000302328 HOXC9P31274 260 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 STK3Q13188 491 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 PIK3R4Q99570 1358 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 TMEM2Q9UHN6 1383 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 DNMT1P26358 1616 aaKnown RBP10.09□□□□□ -0.79
SCN11A-201ENST00000302328 DISP3Q9P2K9 1392 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 ZC3H12CQ9C0D7 883 aaKnown RBP10.09□□□□□ -0.79
SCN11A-201ENST00000302328 KDM5DQ9BY66 1539 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 ZFYVE27Q5T4F4 411 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 CWC27Q6UX04 472 aaKnown RBP10.09□□□□□ -0.79
SCN11A-201ENST00000302328 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 MAPKBP1O60336 1514 aa10.09□□□□□ -0.79
SCN11A-201ENST00000302328 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
SCN11A-201ENST00000302328 PTPRCP08575 1304 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 FBLN1P23142 703 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 YEATS2Q9ULM3 1422 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 ZNF396Q96N95 335 aaPredicted RBP10.08□□□□□ -0.8
SCN11A-201ENST00000302328 RANBP6O60518 1105 aaKnown RBP10.08□□□□□ -0.8
SCN11A-201ENST00000302328 TNNI2P48788 182 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 ALDH1L2Q3SY69 923 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 SASS6Q6UVJ0 657 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
SCN11A-201ENST00000302328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.08□□□□□ -0.8
SCN11A-201ENST00000302328 NAP1L5Q96NT1 182 aaPredicted RBP10.08□□□□□ -0.8
SCN11A-201ENST00000302328 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
SCN11A-201ENST00000302328 SYCP1Q15431 976 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 RPAP2Q8IXW5 612 aaPredicted RBP10.07□□□□□ -0.8
SCN11A-201ENST00000302328 WASF1Q92558 559 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 MAGEC2Q9UBF1 373 aaPredicted RBP10.07□□□□□ -0.8
SCN11A-201ENST00000302328 F6X3S4 739 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 SLC4A8Q2Y0W8 1093 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 HECW2Q9P2P5 1572 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 JARID2Q92833 1246 aaPredicted RBP10.07□□□□□ -0.8
SCN11A-201ENST00000302328 NAP1L1P55209 391 aaKnown RBP10.07□□□□□ -0.8
SCN11A-201ENST00000302328 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 EIF4A2Q14240 407 aaKnown RBP10.07□□□□□ -0.8
SCN11A-201ENST00000302328 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 CHPF2Q9P2E5 772 aa10.07□□□□□ -0.8
SCN11A-201ENST00000302328 FAM83GA6ND36 823 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 PDE4AP27815 886 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 FLIIQ13045 1269 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 FLAD1Q8NFF5 587 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 C22orf23Q9BZE7 217 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 CRNKL1Q9BZJ0 848 aaKnown RBP10.06□□□□□ -0.8
SCN11A-201ENST00000302328 ANKRD2Q9GZV1 360 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 LRRFIP2Q9Y608 721 aaKnown RBP10.06□□□□□ -0.8
SCN11A-201ENST00000302328 UQCRFS1P1P0C7P4 283 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 PICALMQ13492 652 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 EAPPQ56P03 285 aaPredicted RBP10.06□□□□□ -0.8
SCN11A-201ENST00000302328 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 SUPT20HQ8NEM7 779 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 MAP3K5Q99683 1374 aa10.06□□□□□ -0.8
SCN11A-201ENST00000302328 CCDC8Q9H0W5 538 aaPredicted RBP10.06□□□□□ -0.8
SCN11A-201ENST00000302328 PIP4K2AP48426 406 aaPredicted RBP10.05□□□□□ -0.8
SCN11A-201ENST00000302328 IQCA1Q86XH1 822 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 RNF41Q9H4P4 317 aaPredicted RBP10.05□□□□□ -0.8
SCN11A-201ENST00000302328 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
SCN11A-201ENST00000302328 COL17A1Q9UMD9 1497 aaPredicted RBP10.05□□□□□ -0.8
SCN11A-201ENST00000302328 OFD1O75665 1012 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
SCN11A-201ENST00000302328 PDE4BQ07343 736 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 KRT32Q14532 448 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 COPS6Q7L5N1 327 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 TMEM94Q12767 1356 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 MSL1Q68DK7 614 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 CCDC70Q6NSX1 233 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 TMEM57Q8N5G2 664 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 KDM5CP41229 1560 aa10.05□□□□□ -0.8
SCN11A-201ENST00000302328 RNMTO43148 476 aaKnown RBP10.05□□□□□ -0.8
SCN11A-201ENST00000302328 ARHGAP27Q6ZUM4 889 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms