RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 CCDC94Q9BW85 323 aaPredicted RBP14.4□□□□□ -0.1
PDGFD-201ENST00000302251 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
PDGFD-201ENST00000302251 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
PDGFD-201ENST00000302251 PTPN14Q15678 1187 aa14.4□□□□□ -0.1
PDGFD-201ENST00000302251 CLIP2Q9UDT6 1046 aa14.4□□□□□ -0.1
PDGFD-201ENST00000302251 ARGLU1Q9NWB6 273 aaPredicted RBP14.39□□□□□ -0.11
PDGFD-201ENST00000302251 ATP2B1P20020 1258 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 AACSQ86V21 672 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 GPT2Q8TD30 523 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 UBE2HP62256 183 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 GUCY1B3Q02153 619 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 SYNE3Q6ZMZ3 975 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 FANCAO15360 1455 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
PDGFD-201ENST00000302251 RAB11FIP3O75154 756 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
PDGFD-201ENST00000302251 U2AF2P26368 475 aaKnown RBP eCLIP14.38□□□□□ -0.11
PDGFD-201ENST00000302251 TAF7LQ5H9L4 462 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 PTGS1P23219 599 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 ZNF165P49910 485 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 POLR3GO15318 223 aaPredicted RBP14.38□□□□□ -0.11
PDGFD-201ENST00000302251 IL16Q14005 1332 aa14.38□□□□□ -0.11
PDGFD-201ENST00000302251 NEXNQ0ZGT2 675 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 APPP05067 770 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 GPS2Q13227 327 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 JARID2Q92833 1246 aaPredicted RBP14.37□□□□□ -0.11
PDGFD-201ENST00000302251 POLKQ9UBT6 870 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 ZSCAN22P10073 491 aaPredicted RBP14.37□□□□□ -0.11
PDGFD-201ENST00000302251 CEP85Q6P2H3 762 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 CHMP4AQ9BY43 222 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 BOLA2Q9H3K6 86 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
PDGFD-201ENST00000302251 CFAP65Q6ZU64 1925 aaKnown RBP14.37□□□□□ -0.11
PDGFD-201ENST00000302251 ANXA1P04083 346 aa14.36□□□□□ -0.11
PDGFD-201ENST00000302251 RIC3Q7Z5B4 369 aa14.36□□□□□ -0.11
PDGFD-201ENST00000302251 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
PDGFD-201ENST00000302251 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
PDGFD-201ENST00000302251 C1orf141Q5JVX7 400 aa14.36□□□□□ -0.11
PDGFD-201ENST00000302251 TMX1Q9H3N1 280 aa14.36□□□□□ -0.11
PDGFD-201ENST00000302251 NSFL1CQ9UNZ2 370 aaKnown RBP14.36□□□□□ -0.11
PDGFD-201ENST00000302251 LUZP1Q86V48 1076 aa14.36□□□□□ -0.11
PDGFD-201ENST00000302251 CCDC8Q9H0W5 538 aaPredicted RBP14.36□□□□□ -0.11
PDGFD-201ENST00000302251 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
PDGFD-201ENST00000302251 STK38Q15208 465 aa14.35□□□□□ -0.11
PDGFD-201ENST00000302251 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
PDGFD-201ENST00000302251 ANKRD36BQ8N2N9 1353 aa14.35□□□□□ -0.11
PDGFD-201ENST00000302251 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
PDGFD-201ENST00000302251 SLC52A1Q9NWF4 448 aa14.35□□□□□ -0.11
PDGFD-201ENST00000302251 DACT1Q9NYF0 836 aa14.35□□□□□ -0.11
PDGFD-201ENST00000302251 FLIIQ13045 1269 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 ISM2Q6H9L7 571 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
PDGFD-201ENST00000302251 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
PDGFD-201ENST00000302251 SERPINC1P01008 464 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 UVSSAQ2YD98 709 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 BIN1O00499 593 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 WASHC4Q2M389 1173 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
PDGFD-201ENST00000302251 PPP1R42Q7Z4L9 355 aa14.33□□□□□ -0.11
PDGFD-201ENST00000302251 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.11
PDGFD-201ENST00000302251 SYT1P21579 422 aa14.33□□□□□ -0.12
PDGFD-201ENST00000302251 UBXN4Q92575 508 aa14.33□□□□□ -0.12
PDGFD-201ENST00000302251 ZSCAN31Q96LW9 406 aaPredicted RBP14.33□□□□□ -0.12
PDGFD-201ENST00000302251 SETD1AO15047 1707 aaKnown RBP14.33□□□□□ -0.12
PDGFD-201ENST00000302251 NLRP1Q9C000 1473 aa14.33□□□□□ -0.12
PDGFD-201ENST00000302251 GTF2F1P35269 517 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDGFD-201ENST00000302251 BRPF1P55201 1214 aaPredicted RBP14.33□□□□□ -0.12
PDGFD-201ENST00000302251 KIF1BPQ96EK5 621 aa14.33□□□□□ -0.12
PDGFD-201ENST00000302251 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
PDGFD-201ENST00000302251 ADGRL1O94910 1474 aa14.33□□□□□ -0.12
PDGFD-201ENST00000302251 AK2P54819 239 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
PDGFD-201ENST00000302251 KIF18AQ8NI77 898 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 DNAJC25Q9H1X3 360 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 HSP90AB2PQ58FF8 381 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 G2E3Q7L622 706 aa14.32□□□□□ -0.12
PDGFD-201ENST00000302251 ZNF500O60304 480 aaPredicted RBP14.31□□□□□ -0.12
PDGFD-201ENST00000302251 URI1O94763 535 aaPredicted RBP14.31□□□□□ -0.12
PDGFD-201ENST00000302251 SCAND2PQ9GZW5 306 aaPredicted RBP14.31□□□□□ -0.12
PDGFD-201ENST00000302251 ASXL2Q76L83 1435 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 FOXO3O43524 673 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 F13A1P00488 732 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 CEP135Q66GS9 1140 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 CEP57L1Q8IYX8 460 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
PDGFD-201ENST00000302251 GLRX3O76003 335 aaKnown RBP14.31□□□□□ -0.12
PDGFD-201ENST00000302251 CHMLP26374 656 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms