RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 ZNF804AQ7Z570 1209 aa8.4□□□□□ -1.06
RAG1-201ENST00000299440 RDXP35241 583 aaKnown RBP8.4□□□□□ -1.06
RAG1-201ENST00000299440 IQCA1Q86XH1 822 aa8.4□□□□□ -1.06
RAG1-201ENST00000299440 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
RAG1-201ENST00000299440 PATL2C9JE40 543 aaKnown RBP8.4□□□□□ -1.06
RAG1-201ENST00000299440 H0YIN7 160 aa8.4□□□□□ -1.06
RAG1-201ENST00000299440 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
RAG1-201ENST00000299440 CKAP2LQ8IYA6 745 aa8.4□□□□□ -1.06
RAG1-201ENST00000299440 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.06
RAG1-201ENST00000299440 DISP3Q9P2K9 1392 aa8.4□□□□□ -1.07
RAG1-201ENST00000299440 ABCC5O15440 1437 aa8.4□□□□□ -1.07
RAG1-201ENST00000299440 TTC21BQ7Z4L5 1316 aa8.4□□□□□ -1.07
RAG1-201ENST00000299440 KDM5BQ9UGL1 1544 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 TSPY2A6NKD2 308 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 CDKL5O76039 1030 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 GCP02774 474 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 GSTO1P78417 241 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 RBM17Q96I25 401 aaKnown RBP8.39□□□□□ -1.07
RAG1-201ENST00000299440 PDE4AP27815 886 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 NFATC2IPQ8NCF5 419 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 BRD4O60885 1362 aaPredicted RBP8.39□□□□□ -1.07
RAG1-201ENST00000299440 DESP17661 470 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 BLOC1S2Q6QNY1 142 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 C22orf23Q9BZE7 217 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 FAM83GA6ND36 823 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
RAG1-201ENST00000299440 GCC1Q96CN9 775 aa8.39□□□□□ -1.07
RAG1-201ENST00000299440 DPY19L2Q6NUT2 758 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 ZNF396Q96N95 335 aaPredicted RBP8.38□□□□□ -1.07
RAG1-201ENST00000299440 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
RAG1-201ENST00000299440 DNAI2Q9GZS0 605 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 A2MP01023 1474 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 CCDC173Q0VFZ6 552 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 XAGE3Q8WTP9 111 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 JAKMIP1Q96N16 626 aaKnown RBP8.38□□□□□ -1.07
RAG1-201ENST00000299440 STIM1Q13586 685 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 STX8Q9UNK0 236 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 TNNI2P48788 182 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
RAG1-201ENST00000299440 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 WDR63Q8IWG1 891 aa8.38□□□□□ -1.07
RAG1-201ENST00000299440 COPS6Q7L5N1 327 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 GOLIM4O00461 696 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 PRIM1P49642 420 aaKnown RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 MVPQ14764 893 aaKnown RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 KIF1BPQ96EK5 621 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 PI4KAP2A4QPH2 592 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 ME1P48163 572 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 PI4KAP1Q8N8J0 262 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 TRPC5Q9UL62 973 aaPredicted RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 PDZRN3Q9UPQ7 1066 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 PDE4BQ07343 736 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 DDX11Q96FC9 970 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 ZNF518AQ6AHZ1 1483 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 SMARCA5O60264 1052 aaPredicted RBP8.37□□□□□ -1.07
RAG1-201ENST00000299440 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
RAG1-201ENST00000299440 FIBPO43427 364 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 FILIP1LQ4L180 1135 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 ATF5Q9Y2D1 282 aaPredicted RBP8.36□□□□□ -1.07
RAG1-201ENST00000299440 PCDH11XQ9BZA7 1347 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 PCDH11YQ9BZA8 1340 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 ZNF213O14771 459 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 TRIM37O94972 964 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 ANKRD1Q15327 319 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 HELBQ8NG08 1087 aaPredicted RBP8.36□□□□□ -1.07
RAG1-201ENST00000299440 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
RAG1-201ENST00000299440 KAT14Q9H8E8 782 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 IFT57Q9NWB7 429 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 PRXQ9BXM0 1461 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 PDCP20941 246 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 FLIIQ13045 1269 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 BICRAQ9NZM4 1560 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 IFIT3O14879 490 aaKnown RBP8.36□□□□□ -1.07
RAG1-201ENST00000299440 UFL1O94874 794 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 CAGE1Q8TC20 777 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 WASF1Q92558 559 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 PICK1Q9NRD5 415 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 CHMP5Q9NZZ3 219 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 SMC2O95347 1197 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 CYP7A1P22680 504 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 SKIDA1Q1XH10 827 aa8.36□□□□□ -1.07
RAG1-201ENST00000299440 U3KPZ7 1027 aaPredicted RBP8.36□□□□□ -1.07
RAG1-201ENST00000299440 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 RNF41Q9H4P4 317 aaPredicted RBP8.35□□□□□ -1.07
RAG1-201ENST00000299440 PDRG1Q9NUG6 133 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 CHPF2Q9P2E5 772 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 TSPY3P0CV98 308 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 TSPY8P0CW00 308 aa8.35□□□□□ -1.07
RAG1-201ENST00000299440 NIM1KQ8IY84 436 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms