RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
RPUSD4-201ENST00000298317 NRKQ7Z2Y5 1582 aa16.14■□□□□ 0.17
RPUSD4-201ENST00000298317 RAD50Q92878 1312 aa16.14■□□□□ 0.17
RPUSD4-201ENST00000298317 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
RPUSD4-201ENST00000298317 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
RPUSD4-201ENST00000298317 TMEM131LA2VDJ0 1609 aa16.13■□□□□ 0.17
RPUSD4-201ENST00000298317 SLFN14P0C7P3 912 aa16.13■□□□□ 0.17
RPUSD4-201ENST00000298317 AK2P54819 239 aa16.13■□□□□ 0.17
RPUSD4-201ENST00000298317 RUFY3Q7L099 469 aa16.13■□□□□ 0.17
RPUSD4-201ENST00000298317 LIMCH1Q9UPQ0 1083 aa16.13■□□□□ 0.17
RPUSD4-201ENST00000298317 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
RPUSD4-201ENST00000298317 CDK11BP21127 795 aaKnown RBP16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 SNX14Q9Y5W7 946 aa16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 MTMR6Q9Y217 621 aa16.12■□□□□ 0.17
RPUSD4-201ENST00000298317 F6X3S4 739 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 NME9Q86XW9 330 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 C16orf45Q96MC5 204 aaPredicted RBP16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 PAXBP1Q9Y5B6 917 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 ARHGEF10O15013 1369 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 ZBTB22O15209 634 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 G2E3Q7L622 706 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 CCDC186Q7Z3E2 898 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
RPUSD4-201ENST00000298317 PNMA6EA0A0J9YXQ4 647 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 SLC52A1Q9NWF4 448 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 CRB1P82279 1406 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 TNNT1P13805 278 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 ATP8B2P98198 1209 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 LRMPQ12912 555 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 KIF18AQ8NI77 898 aa16.1■□□□□ 0.17
RPUSD4-201ENST00000298317 SGSM2O43147 1006 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 MCM10Q7L590 875 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 TYRO3Q06418 890 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 RRS1Q15050 365 aaKnown RBP16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 MAP3K11Q16584 847 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 ZSCAN25Q6NSZ9 544 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 PLA2G4DQ86XP0 818 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 LSG1Q9H089 658 aaKnown RBP16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 ZRANB1Q9UGI0 708 aa16.09■□□□□ 0.17
RPUSD4-201ENST00000298317 LARGE1O95461 756 aa16.08■□□□□ 0.17
RPUSD4-201ENST00000298317 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.17
RPUSD4-201ENST00000298317 LUZP1Q86V48 1076 aa16.08■□□□□ 0.17
RPUSD4-201ENST00000298317 RASEFQ8IZ41 740 aa16.08■□□□□ 0.17
RPUSD4-201ENST00000298317 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.17
RPUSD4-201ENST00000298317 GJB2P29033 226 aa16.08■□□□□ 0.16
RPUSD4-201ENST00000298317 NAA30Q147X3 362 aaPredicted RBP16.08■□□□□ 0.16
RPUSD4-201ENST00000298317 TERF2Q15554 542 aa16.08■□□□□ 0.16
RPUSD4-201ENST00000298317 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
RPUSD4-201ENST00000298317 GNAI3P08754 354 aa16.07■□□□□ 0.16
RPUSD4-201ENST00000298317 ZNF75DP51815 510 aa16.07■□□□□ 0.16
RPUSD4-201ENST00000298317 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
RPUSD4-201ENST00000298317 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
RPUSD4-201ENST00000298317 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
RPUSD4-201ENST00000298317 ELP1O95163 1332 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 CPS1P31327 1500 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 MON2Q7Z3U7 1717 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 COG3Q96JB2 828 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 FAM53CQ9NYF3 392 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 NRBP1Q9UHY1 535 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 TTC6Q86TZ1 520 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 KRT222Q8N1A0 295 aa16.06■□□□□ 0.16
RPUSD4-201ENST00000298317 CCDC171Q6TFL3 1326 aa16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 CCDC83Q8IWF9 413 aa16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 TDRD7Q8NHU6 1098 aaKnown RBP16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 CRYBG1Q9Y4K1 1723 aa16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 RBM43Q6ZSC3 357 aaKnown RBP16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 ZNF397Q8NF99 534 aaPredicted RBP16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
RPUSD4-201ENST00000298317 CCDC66A2RUB6 948 aa16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 LIG1P18858 919 aa16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 ANO6Q4KMQ2 910 aa16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 C3P01024 1663 aa16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 SOS1Q07889 1333 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 EIF4A2Q14240 407 aaKnown RBP16.04■□□□□ 0.16
RPUSD4-201ENST00000298317 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 KRT85P78386 507 aa16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 TPD52L1Q16890 204 aaPredicted RBP16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 DRC7Q8IY82 874 aa16.03■□□□□ 0.16
RPUSD4-201ENST00000298317 CACTINQ8WUQ7 758 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms